SMTL ID : 8j1q.1

CryoEM structure of SARS CoV-2 RBD and Aptamer complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain E: N.25, S.53 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:S.53, E:S.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rahman, M.S. et al., Structure-Guided Development of Bivalent Aptamers Blocking SARS-CoV-2 Infection. Molecules (2023)

Release Date

2023-06-21

Peptides

Fab Light chain (REGN10987): C
Fab heavy chain (REGN10987): D
Spike protein S1: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

D
B

E
C

Fab Light chain (REGN10987)

Fab heavy chain (REGN10987)

Spike protein S1

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