SMTL ID : 8j2s.2 (6 other biounits)

Glucosyl transferase NbUGT72AY1 co-crystallized with Scopoletin, UDP-2F Glucose and Retinol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.26 Å

Oligo State

monomer

Ligands

1 x U2F: URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE(Covalent)

U2F.1: 21 residues within 4Å: Chain A: G.22, P.145, T.146, R.254, S.280, G.282, S.283, V.309, R.311, W.355, A.356, Q.358, H.373, G.375, W.376, N.377, S.378, E.381, A.396, E.397, Q.398 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:P.145, A:R.254, A:R.254, A:S.283, A:R.311, A:A.356, A:A.356, A:Q.358, A:W.376, A:N.377, A:N.377, A:S.378, A:Q.398 Salt bridges: A:H.373, A:H.373 pi-Stacking: A:W.355 Halogen bonds: A:G.22

1 x T83: 7-hydroxy-6-methoxy-2H-1-benzopyran-2-one(Non-covalent)

T83.2: 8 residues within 4Å: Chain A: F.92, I.124, F.125, T.146, V.189, Y.203, A.396, E.397 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.92, A:A.396

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hameed, U.F.S. et al., Glucosyl transferase NbUGT72AY1 co-crystallized with Scopoletin, UDP-2F Glucose and Retinol. To Be Published

Release Date

2024-04-17

Peptides

Glycosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Glycosyltransferase

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