SMTL ID : 8j49.1

Crystal structure of OY phytoplasma SAP05 in complex with AtSPL5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

hetero-1-2-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.5, C.10, C.27, H.30 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.5, A:C.10, A:C.27, A:H.30 ZN.2: 4 residues within 4Å: Chain A: C.46, C.49, H.53, C.65 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.46, A:C.49, A:H.53, A:C.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, X. et al., Molecular basis of SAP05-mediated ubiquitin-independent proteasomal degradation of transcription factors. Nat Commun (2024)

Release Date

2024-02-28

Peptides

Squamosa promoter-binding-like protein 5: A
Sequence-variable mosaic (SVM) signal sequence domain-containing protein: BC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
D

Squamosa promoter-binding-like protein 5

Sequence-variable mosaic (SVM) signal sequence domain-containing protein