SMTL ID : 8j4k.1

X-ray crystal structure of F46C myoglobin with a covalently linked phenol group

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.46 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 17 residues within 4Å: Chain A: T.40, K.43, F.44, H.65, T.68, V.69, A.72, L.90, S.93, H.94, H.98, I.100, Y.104, L.105, I.108, F.139 Ligands: 9UU.2 23 PLIP interactions: 23 interactions with chain A, Hydrophobic interactions: A:K.43, A:F.44, A:F.44, A:T.68, A:V.69, A:A.72, A:L.90, A:L.90, A:I.100, A:I.100, A:Y.104, A:L.105, A:I.108, A:F.139 Hydrogen bonds: A:S.93 Water bridges: A:R.46, A:R.46, A:S.93 Salt bridges: A:H.65, A:H.94, A:H.98 pi-Stacking: A:H.98 Metal complexes: A:H.94

1 x 9UU: 1-(4-hydroxyphenyl)pyrrole-2,5-dione

9UU.2: 9 residues within 4Å: Chain A: F.34, T.40, L.41, K.43, F.44, C.47, H.65, V.69 Ligands: HEM.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.34, A:L.41, A:F.44, A:H.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yuan, H. et al., X-ray crystal structure of F46C myoglobin with a covalently linked phenol group. To Be Published

Release Date

2024-04-24

Peptides

Myoglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myoglobin

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