SMTL ID : 8j4y.4 (3 other biounits)

Structure of Mycobacterium tuberculosis NrdF2:NrdIcomplex (reduced) determined at 3 angstrom resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.02 Å

Oligo State

homo-dimer

Ligands

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: E.103, E.163, E.197, H.200 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.103, A:E.163, A:E.197, A:E.197, A:H.200 MN.2: 6 residues within 4Å: Chain A: D.72, E.103, H.106, F.167, I.193, E.197 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.72, A:E.103, A:E.197 MN.3: 4 residues within 4Å: Chain B: E.103, E.163, E.197, H.200 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.103, B:E.163, B:E.197, B:E.197, B:H.200 MN.4: 6 residues within 4Å: Chain B: D.72, E.103, H.106, F.167, I.193, E.197 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.72, B:E.103, B:E.197

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yadav, L.R. et al., Structural insights into the initiation of free radical formation in the Class Ib ribonucleotide reductases in Mycobacteria. Curr Res Struct Biol (2024)

Release Date

2024-10-09

Peptides

Ribonucleoside-diphosphate reductase subunit beta nrdF2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
E

Ribonucleoside-diphosphate reductase subunit beta nrdF2

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