SMTL ID : 8j6y.1

Crystal structure of class A beta-lactamase PSE-4 WT- Apo state

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

16 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: Q.27, K.30 Ligand excluded by PLIP SO4.2: 2 residues within 4Å: Chain A: K.30, Y.55 Ligand excluded by PLIP SO4.3: 7 residues within 4Å: Chain A: G.236, M.265, R.268 Chain B: S.264, M.265, E.266 Ligands: SO4.11 Ligand excluded by PLIP SO4.4: 8 residues within 4Å: Chain A: T.64, S.65, K.68, S.125, S.230, G.231, A.232, R.238 Ligand excluded by PLIP SO4.5: 5 residues within 4Å: Chain A: W.224, S.246, E.247, H.248, Q.249 Ligand excluded by PLIP SO4.6: 2 residues within 4Å: Chain A: R.156, L.172 Ligand excluded by PLIP SO4.7: 4 residues within 4Å: Chain A: N.165, E.166, G.234, F.235 Ligand excluded by PLIP SO4.8: 3 residues within 4Å: Chain A: R.159, K.168, R.173 Ligand excluded by PLIP SO4.9: 2 residues within 4Å: Chain B: Q.27, K.30 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain B: K.30, Y.55 Ligand excluded by PLIP SO4.11: 7 residues within 4Å: Chain A: S.264, M.265, E.266 Chain B: G.236, M.265, R.268 Ligands: SO4.3 Ligand excluded by PLIP SO4.12: 8 residues within 4Å: Chain B: T.64, S.65, K.68, S.125, S.230, G.231, A.232, R.238 Ligand excluded by PLIP SO4.13: 5 residues within 4Å: Chain B: W.224, S.246, E.247, H.248, Q.249 Ligand excluded by PLIP SO4.14: 2 residues within 4Å: Chain B: R.156, L.172 Ligand excluded by PLIP SO4.15: 4 residues within 4Å: Chain B: N.165, E.166, G.234, F.235 Ligand excluded by PLIP SO4.16: 3 residues within 4Å: Chain B: R.159, K.168, R.173 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sarkar, M. et al., Crystal structure of class A beta-lactamase PSE-4 WT- Apo state. To be published

Release Date

2024-05-01

Peptides

Beta-lactamase PSE-4: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Beta-lactamase PSE-4