SMTL ID : 8j9r.1

Crystal structure of UBR box of YIFS-UBR4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.39, C.43, C.61, C.69, L.70, A.71 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.39, A:C.43, A:C.61, A:C.69 ZN.2: 8 residues within 4Å: Chain A: C.7, T.8, F.9, C.36, C.39, C.59, C.61, G.62 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.7, A:C.36, A:C.39, A:C.59 ZN.3: 5 residues within 4Å: Chain A: C.24, T.26, C.27, H.44, H.47 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.24, A:C.27, A:H.44, A:H.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jeong, D.E. et al., Insights into the recognition mechanism in the UBR box of UBR4 for its specific substrates. Commun Biol (2023)

Release Date

2023-12-06

Peptides

E3 ubiquitin-protein ligase UBR4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase UBR4