SMTL ID : 8jjv.1

Structure of truncated form of nanobody in complex with alpha-synuclein peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.23 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: Y.32, R.98 Chain B: E.4 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Y.32, A:R.98, B:E.4 GOL.2: 1 residues within 4Å: Chain A: S.25 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.25 Water bridges: A:S.25, A:D.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Islam, Z. et al., Structural insights into the unique recognition module between alpha-synuclein peptide and nanobody. Protein Sci. (2024)

Release Date

2024-01-10

Peptides

Nanobody: A
Alpha-synuclein peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nanobody

Alpha-synuclein peptide

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