SMTL ID : 8jn8.1

Crystal structure of c-Src in complex with covalent inhibitor DC-Srci-6668

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x JA6: (2R)-N-cyclopentyl-2-[cyclopropyl(ethanoyl)amino]-2-(4-fluorophenyl)ethanamide(Covalent)

JA6.1: 17 residues within 4Å: Chain A: G.279, C.280, F.281, G.282, E.283, V.284, K.298, L.300, D.389, R.391, N.394, D.407, L.410, A.411, I.414, Y.419, K.426 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.284, A:K.298, A:L.300, A:D.407, A:I.414, A:Y.419, A:K.426 Hydrogen bonds: A:C.280, A:F.281 Halogen bonds: A:D.407

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H.M. et al., The crystal structure of c-Src in complex with covalent inhibitor DC-Srci-6668. To Be Published

Release Date

2024-06-12

Peptides

Proto-oncogene tyrosine-protein kinase Src: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proto-oncogene tyrosine-protein kinase Src

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