SMTL ID : 8jpq.1

SARS-CoV-2 Mpro in complex with D-5-96

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x ACY- ALA- ILE- V3E: ACY-ALA-ILE-V3E(Non-functional Binders)

ACY-ALA-ILE-V3E.1: 13 residues within 4Å: Chain A: T.24, T.25, T.26, L.27, H.41, C.44, T.45, S.46, M.49, N.142, G.143, S.144, C.145 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:T.25, A:T.26, A:L.27, A:N.142 Hydrogen bonds: A:T.26, A:T.26, A:H.41, A:C.44, A:G.143, A:C.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, M. et al., The S1'-S3' Pocket of the SARS-CoV-2 Main Protease Is Critical for Substrate Selectivity and Can Be Targeted with Covalent Inhibitors. Angew.Chem.Int.Ed.Engl. (2023)

Release Date

2023-08-23

Peptides

3C-like proteinase nsp5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3C-like proteinase nsp5

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