- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-1-mer
- Ligands
- 223 x CLA: CHLOROPHYLL A(Non-covalent)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
PQN.32: 15 residues within 4Å:- Chain A: M.578, F.579, S.582, G.583, R.584, W.587, I.591, A.611, L.612, G.617
- Ligands: CLA.4, CLA.31, CLA.37, CLA.41, BCR.77
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:F.579, A:F.579, A:W.587, A:I.591, A:L.612, A:L.612, A:L.612
- Hydrogen bonds: A:S.582, A:L.612
- pi-Stacking: A:W.587
PQN.65: 18 residues within 4Å:- Chain B: Y.9, M.547, F.548, S.551, W.552, R.553, W.556, I.560, A.586, L.587, A.592
- Chain H: F.29
- Ligands: CLA.26, CLA.40, CLA.63, CLA.64, BCR.67, BCR.102
13 PLIP interactions:12 interactions with chain B, 1 interactions with chain H- Hydrophobic interactions: B:Y.9, B:F.548, B:R.553, B:W.556, B:W.556, B:W.556, B:I.560, B:L.587, B:L.587, B:A.592, H:F.29
- Hydrogen bonds: B:L.587
- pi-Stacking: B:W.556
- 1 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.33: 25 residues within 4Å:- Chain A: W.26, N.27, H.29, A.30, D.31, F.321, R.465, W.482, L.489, S.613, T.615, S.616, A.619, L.622, T.623, L.626, L.627, I.630
- Ligands: CLA.4, CLA.5, CLA.7, CLA.23, CLA.25, CLA.31, CLA.37
13 PLIP interactions:13 interactions with chain A- Hydrophobic interactions: A:W.26, A:H.29, A:F.321, A:L.489, A:L.622, A:T.623, A:L.626, A:L.627, A:I.630
- Hydrogen bonds: A:R.465, A:S.613
- Salt bridges: A:R.465, A:R.465
- 12 x BCR: BETA-CAROTENE(Non-covalent)
BCR.34: 15 residues within 4Å:- Chain A: F.57, L.60, I.125, F.128, G.129, L.172, A.176
- Ligands: CLA.6, CLA.15, CLA.16, CLA.17, BCR.35, DD6.186, CLA.247, CLA.248
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:F.57, A:L.60, A:F.128, A:L.172, A:A.176
BCR.35: 13 residues within 4Å:- Chain A: W.59, L.172, G.173
- Ligands: CLA.6, CLA.7, CLA.13, CLA.14, CLA.15, CLA.19, CLA.24, BCR.34, DD6.186, CLA.243
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:W.59, A:L.172
BCR.38: 18 residues within 4Å:- Chain A: V.55, I.58, W.59
- Chain I: S.54, A.57, L.61
- Ligands: CLA.2, CLA.7, CLA.8, CLA.9, CLA.10, CLA.31, CLA.41, CLA.58, CLA.59, BCR.77, CLA.78, PID.91
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain I- Hydrophobic interactions: A:V.55, A:I.58, A:W.59, I:A.57, I:L.61
BCR.66: 20 residues within 4Å:- Chain B: S.242, T.246, I.250, G.293, F.294, G.297, F.300, L.301, V.312, L.315, I.367, I.420, A.423, L.424
- Ligands: CLA.51, CLA.52, CLA.53, CLA.60, CLA.62, DGD.84
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:F.294, B:F.300, B:L.301, B:V.312, B:L.315, B:I.367, B:I.420, B:A.423, B:L.424
BCR.67: 16 residues within 4Å:- Chain B: V.530, W.533, L.537, W.556, I.560
- Ligands: CLA.3, CLA.26, CLA.40, CLA.43, CLA.46, CLA.54, CLA.56, CLA.63, CLA.64, PQN.65, LMG.68
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:V.530, B:W.533, B:L.537, B:W.556, B:I.560
BCR.73: 15 residues within 4Å:- Chain B: P.571, F.572
- Chain H: F.19
- Chain J: S.193, A.196, V.197
- Ligands: CLA.20, CLA.26, CLA.27, CLA.40, CLA.63, CLA.64, CLA.89, BCR.90, CLA.100
3 PLIP interactions:1 interactions with chain J, 1 interactions with chain B, 1 interactions with chain H- Hydrophobic interactions: J:V.197, B:F.572, H:F.19
BCR.77: 12 residues within 4Å:- Chain B: L.331, F.335
- Chain F: F.115, T.118
- Ligands: CLA.2, PQN.32, CLA.37, BCR.38, CLA.39, CLA.58, CLA.59, CLA.78
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain F- Hydrophobic interactions: B:L.331, B:F.335, B:F.335, F:F.115, F:F.115, F:T.118
BCR.80: 16 residues within 4Å:- Chain A: L.601
- Chain B: F.363
- Chain F: A.99, T.100, G.101, G.120, G.123, Y.124, W.157, S.161, F.170
- Ligands: CLA.39, CLA.58, CLA.61, CLA.79, CLA.129
5 PLIP interactions:1 interactions with chain B, 4 interactions with chain F- Hydrophobic interactions: B:F.363, F:W.157, F:W.157, F:F.170, F:F.170
BCR.90: 16 residues within 4Å:- Chain H: T.17, I.18, F.19, G.22, M.26
- Ligands: CLA.26, CLA.27, CLA.43, CLA.46, CLA.63, CLA.64, BCR.73, CLA.87, CLA.88, CLA.89, DGD.108
3 PLIP interactions:3 interactions with chain H- Hydrophobic interactions: H:T.17, H:I.18, H:F.19
BCR.102: 23 residues within 4Å:- Chain H: A.25, M.26, F.29, V.30
- Chain J: I.162, H.166, V.201, G.204, G.205, L.207, F.208, F.228, I.232, H.235
- Ligands: CLA.26, CLA.40, CLA.63, CLA.64, PQN.65, LMG.70, CLA.87, CLA.100, DGD.108
7 PLIP interactions:3 interactions with chain H, 4 interactions with chain J- Hydrophobic interactions: H:M.26, H:F.29, H:F.29, J:I.162, J:L.207, J:F.228, J:I.232
BCR.103: 15 residues within 4Å:- Chain J: M.164, A.165, Y.168, G.241, G.242, F.245
- Chain Q: F.95
- Ligands: CLA.20, CLA.27, CLA.99, CLA.100, CLA.101, CLA.105, CLA.211, SQD.216
7 PLIP interactions:6 interactions with chain J, 1 interactions with chain Q- Hydrophobic interactions: J:M.164, J:Y.168, J:Y.168, J:F.245, J:F.245, J:F.245, Q:F.95
BCR.109: 21 residues within 4Å:- Chain 2: V.45, W.49
- Chain B: G.37, V.41, L.44, L.128
- Chain K: A.30, L.33, I.34, A.36, A.37, V.39, L.40, A.43, V.46, T.47
- Ligands: CLA.87, CLA.88, DD6.283, CLA.400, KC1.407
14 PLIP interactions:10 interactions with chain K, 2 interactions with chain 2, 2 interactions with chain B- Hydrophobic interactions: K:A.30, K:L.33, K:I.34, K:I.34, K:A.36, K:A.37, K:V.39, K:L.40, K:A.43, K:V.46, 2:W.49, 2:W.49, B:V.41, B:L.128
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.36: 11 residues within 4Å:- Chain A: P.467, C.468, G.470, P.471, C.477, R.618
- Chain B: C.444, G.446, C.453, W.552, I.589
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A,- Metal complexes: B:C.444, B:C.453, A:C.468, A:C.477
SF4.75: 13 residues within 4Å:- Chain C: C.20, P.21, T.22, V.24, I.25, C.47, V.48, G.49, C.50, K.51, R.52, C.53, V.66
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.20, C:C.47, C:C.50, C:C.53
SF4.76: 12 residues within 4Å:- Chain C: C.10, I.11, G.12, C.13, T.14, C.16, M.27, A.56, C.57, P.58, T.59, I.64
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.10, C:C.13, C:C.16, C:C.57
- 11 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.68: 20 residues within 4Å:- Chain B: W.45, A.48, Y.49, H.52, N.73, H.74, A.92, L.93, N.95, H.96, D.527, L.528, W.531, L.609, V.613, S.617
- Ligands: CLA.46, CLA.54, BCR.67, CLA.88
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:A.48, B:Y.49, B:Y.49, B:L.609
- Hydrogen bonds: B:L.93, B:N.95, B:D.527, B:S.617
- Salt bridges: B:H.74
LMG.70: 18 residues within 4Å:- Chain B: F.10, Q.11, G.14, N.15, G.441, W.458, F.461, F.465, Q.591, F.594, I.595, V.601
- Ligands: CLA.45, CLA.54, CLA.56, CLA.64, CLA.87, BCR.102
15 PLIP interactions:15 interactions with chain B- Hydrophobic interactions: B:F.10, B:F.10, B:F.461, B:F.465, B:F.594, B:F.594, B:F.594, B:F.594, B:I.595, B:V.601
- Hydrogen bonds: B:F.10, B:Q.11, B:N.15, B:G.441, B:Q.591
LMG.72: 9 residues within 4Å:- Chain B: R.115, F.116, L.120, T.123
- Ligands: CLA.44, CLA.47, CLA.55, DD6.107, CLA.279
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:F.116, B:F.116
- Hydrogen bonds: B:R.115
- Salt bridges: B:R.115
LMG.86: 12 residues within 4Å:- Chain B: V.214
- Chain G: I.108, A.111, S.112, P.115
- Ligands: CLA.49, CLA.53, CLA.69, CLA.81, CLA.82, DD6.83, PID.85
1 PLIP interactions:1 interactions with chain G- Hydrogen bonds: G:I.108
LMG.92: 18 residues within 4Å:- Chain A: L.138, F.142, S.146
- Chain I: V.10, S.11, V.12, R.16, S.24, V.26
- Chain J: W.59, W.60, L.63
- Chain O: A.37
- Chain S: F.125, E.126
- Ligands: CLA.11, LMG.166, DD6.186
12 PLIP interactions:3 interactions with chain J, 5 interactions with chain I, 1 interactions with chain S, 3 interactions with chain A- Hydrophobic interactions: J:W.59, J:W.59, J:L.63, S:F.125, A:L.138
- Hydrogen bonds: I:V.12, I:R.16, I:R.16, I:S.24, I:S.24, A:S.146, A:S.146
LMG.128: 8 residues within 4Å:- Chain L: F.92, L.96
- Chain U: K.24
- Ligands: CLA.119, DD6.265, DD6.269, CLA.270, CLA.271
4 PLIP interactions:1 interactions with chain L, 3 interactions with chain U- Hydrophobic interactions: L:L.96
- Hydrogen bonds: U:K.24, U:E.146
- Salt bridges: U:K.24
LMG.166: 20 residues within 4Å:- Chain A: L.138
- Chain I: S.24, V.26, T.27, P.28
- Chain O: M.32, G.33, F.34, L.36, A.37, L.38
- Chain S: K.122, E.126
- Ligands: CLA.11, CLA.12, CLA.13, LMG.92, DGD.95, CLA.175, DD6.186
6 PLIP interactions:4 interactions with chain O, 2 interactions with chain S- Hydrophobic interactions: O:F.34, O:L.38, O:L.38
- Hydrogen bonds: O:M.32, S:K.122, S:K.122
LMG.184: 14 residues within 4Å:- Chain I: P.29, I.30, S.31, S.32
- Chain O: R.41, W.42, F.107, I.110, T.111, M.114, E.115
- Ligands: DGD.95, DGD.96, CLA.178
5 PLIP interactions:4 interactions with chain O, 1 interactions with chain I- Hydrophobic interactions: O:W.42, O:F.107, O:T.111
- Hydrogen bonds: O:R.41, I:P.29
LMG.185: 11 residues within 4Å:- Chain N: W.184, M.190
- Chain O: V.87, A.93, L.96, I.97, G.100, I.101
- Ligands: CLA.149, CLA.178, CLA.182
3 PLIP interactions:3 interactions with chain O- Hydrophobic interactions: O:L.96, O:I.97
- Hydrogen bonds: O:V.87
LMG.379: 8 residues within 4Å:- Chain 1: F.96, Q.100
- Chain O: E.27, R.147
- Ligands: DD6.167, DD6.171, CLA.172, CLA.173
2 PLIP interactions:2 interactions with chain O- Hydrogen bonds: O:E.27, O:R.147
LMG.411: 12 residues within 4Å:- Chain 2: P.7, T.9, E.10
- Chain J: L.206, G.209, A.210, T.223, A.224, S.226, T.229
- Ligands: CLA.106, CLA.400
6 PLIP interactions:1 interactions with chain 2, 5 interactions with chain J- Hydrogen bonds: 2:T.9, J:G.209, J:T.223, J:A.224
- Hydrophobic interactions: J:L.206, J:L.206
- 8 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.71: 18 residues within 4Å:- Chain B: L.221, S.225, W.229, F.231, T.233, N.309
- Chain D: Y.209, N.210, V.212
- Chain G: R.38, L.58, W.119, A.123
- Ligands: CLA.51, CLA.69, DGD.84, CLA.130, PID.131
8 PLIP interactions:3 interactions with chain B, 3 interactions with chain G, 2 interactions with chain D- Hydrophobic interactions: B:L.221, B:W.229, B:W.229, G:L.58, G:A.123
- Hydrogen bonds: G:R.38, D:Y.209, D:N.210
DGD.84: 19 residues within 4Å:- Chain B: W.229, Q.234, L.239, N.309, L.311, V.312, K.314
- Chain G: W.47, K.51, L.53
- Chain M: Q.19, P.22
- Ligands: CLA.51, CLA.52, CLA.57, BCR.66, DGD.71, CLA.130, PID.131
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:Q.234, B:L.239, B:L.239, B:L.311, B:L.311, B:V.312
- Hydrogen bonds: B:K.314, B:K.314
DGD.93: 16 residues within 4Å:- Chain F: I.142, D.143, V.144, P.145, L.148
- Chain I: E.33, Q.36, E.37, L.39, S.40, F.45, A.48
- Chain N: W.34, F.35
- Ligands: DGD.96, CLA.158
13 PLIP interactions:4 interactions with chain F, 3 interactions with chain N, 6 interactions with chain I- Hydrophobic interactions: F:V.144, F:L.148, N:W.34, N:F.35, N:F.35, I:F.45, I:F.45, I:A.48
- Hydrogen bonds: F:D.143, F:V.144, I:E.37, I:E.37, I:S.40
DGD.95: 11 residues within 4Å:- Chain I: I.25, T.27, P.28, P.29, I.30
- Chain O: D.39, R.41, W.42
- Ligands: LMG.166, CLA.175, LMG.184
7 PLIP interactions:4 interactions with chain I, 3 interactions with chain O- Hydrophobic interactions: I:I.30, O:W.42
- Hydrogen bonds: I:T.27, I:T.27, I:P.28, O:D.39, O:R.41
DGD.96: 16 residues within 4Å:- Chain I: S.31, S.32, E.33, Q.36, L.39
- Chain N: I.29, N.33, W.34
- Chain O: V.104, F.107, L.108, T.111, E.115, T.117
- Ligands: DGD.93, LMG.184
11 PLIP interactions:7 interactions with chain I, 2 interactions with chain N, 2 interactions with chain O- Hydrophobic interactions: I:Q.36, I:L.39, N:I.29, O:V.104, O:L.108
- Hydrogen bonds: I:S.31, I:S.32, I:S.32, I:E.33, I:Q.36, N:N.33
DGD.108: 19 residues within 4Å:- Chain 2: E.112, R.116
- Chain H: G.20, V.21, T.24, A.25, M.26, F.29, R.48
- Chain K: I.44, K.48, F.51, Y.52
- Chain U: K.115
- Ligands: CLA.87, CLA.88, BCR.90, BCR.102, CLA.400
13 PLIP interactions:4 interactions with chain K, 6 interactions with chain H, 1 interactions with chain 2, 2 interactions with chain U- Hydrophobic interactions: K:I.44, K:F.51, H:V.21, H:T.24, H:A.25, H:F.29
- Salt bridges: K:K.48, K:K.48
- Hydrogen bonds: H:R.48, H:R.48, 2:E.112, U:K.115, U:K.115
DGD.148: 12 residues within 4Å:- Chain F: P.158, V.159, W.162, Q.163
- Chain M: E.50, A.51, W.52, D.53, L.55, H.58, K.59
- Ligands: CLA.160
8 PLIP interactions:5 interactions with chain M, 3 interactions with chain F- Hydrophobic interactions: M:L.55, F:P.158, F:V.159
- Hydrogen bonds: M:E.50, M:D.53, M:K.59, M:K.59, F:Q.163
DGD.282: 16 residues within 4Å:- Chain B: A.133, G.137, L.138, S.140, M.141
- Chain K: T.58, K.61
- Chain U: R.15, I.34, I.35, D.36, W.39, G.111, L.112
- Ligands: CLA.127, CLA.273
9 PLIP interactions:7 interactions with chain U, 1 interactions with chain B, 1 interactions with chain K- Hydrophobic interactions: U:I.34, U:I.34, U:I.35, B:L.138
- Hydrogen bonds: U:R.15, U:D.36, U:L.112, U:L.112, K:K.61
- 49 x DD6: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol(Non-covalent)
DD6.83: 14 residues within 4Å:- Chain B: V.172, I.213
- Chain G: E.84, F.87, L.88, F.94, F.103, I.108, A.111
- Ligands: CLA.81, CLA.82, PID.85, LMG.86, CLA.126
9 PLIP interactions:1 interactions with chain B, 8 interactions with chain G- Hydrophobic interactions: B:I.213, G:F.87, G:F.87, G:L.88, G:F.94, G:F.103, G:I.108, G:I.108, G:A.111
DD6.107: 15 residues within 4Å:- Chain B: Q.32, F.36, L.39, M.127, M.141, G.142, V.146, I.150, C.153
- Chain K: Y.84
- Ligands: CLA.44, CLA.47, CLA.48, LMG.72, CLA.127
6 PLIP interactions:1 interactions with chain K, 5 interactions with chain B- Hydrogen bonds: K:Y.84, B:Q.32
- Hydrophobic interactions: B:F.36, B:L.39, B:V.146, B:I.150
DD6.110: 14 residues within 4Å:- Chain L: K.42, I.46, L.49, P.63, G.64, V.89, C.93, L.96, E.97, Y.130
- Ligands: CLA.118, CLA.119, CLA.120, CLA.121
5 PLIP interactions:5 interactions with chain L- Hydrophobic interactions: L:I.46, L:I.46, L:L.49, L:V.89, L:L.96
DD6.111: 18 residues within 4Å:- Chain L: F.20, D.21, P.22, L.23, G.24, L.25, H.43, I.46, A.50, L.54, A.73, A.76, M.159, F.162
- Ligands: CLA.116, CLA.117, CLA.118, CLA.124
13 PLIP interactions:13 interactions with chain L- Hydrophobic interactions: L:F.20, L:P.22, L:L.23, L:A.50, L:L.54, L:M.159, L:F.162, L:F.162, L:F.162
- Hydrogen bonds: L:D.21, L:L.23, L:G.24, L:A.73
DD6.113: 17 residues within 4Å:- Chain L: Y.18, F.20, V.74, H.77, S.78, L.160, F.162, G.163, I.166, T.170
- Ligands: KC1.114, CLA.116, CLA.117, CLA.123, CLA.124, CLA.125, DD6.249
10 PLIP interactions:10 interactions with chain L- Hydrophobic interactions: L:F.20, L:F.20, L:H.77, L:F.162, L:I.166, L:I.166
- Hydrogen bonds: L:Y.18, L:Y.18, L:H.77, L:S.78
DD6.133: 10 residues within 4Å:- Chain M: E.46, K.186, R.189, L.190, V.193
- Chain N: S.85, F.89
- Ligands: CLA.139, CLA.140, CLA.147
7 PLIP interactions:4 interactions with chain M, 3 interactions with chain N- Hydrophobic interactions: M:E.46, M:V.193, M:V.193, N:F.89, N:F.89
- Hydrogen bonds: M:R.189, N:S.85
DD6.134: 16 residues within 4Å:- Chain M: K.85, R.88, V.89, L.92, I.105, G.106, I.134, I.138, I.141, E.142, L.162
- Chain T: M.80
- Ligands: CLA.142, KC1.143, CLA.144, CLA.145
10 PLIP interactions:9 interactions with chain M, 1 interactions with chain T- Hydrophobic interactions: M:K.85, M:R.88, M:V.89, M:L.92, M:I.134, M:I.138, M:I.138, M:I.141, T:M.80
- Hydrogen bonds: M:R.88
DD6.135: 20 residues within 4Å:- Chain M: W.52, D.53, P.54, L.55, F.57, H.86, V.89, C.90, A.93, C.97, Q.100, W.114, A.117, L.118, M.192
- Ligands: PID.138, CLA.140, CLA.141, CLA.142, CLA.144
12 PLIP interactions:12 interactions with chain M- Hydrophobic interactions: M:W.52, M:P.54, M:L.55, M:F.57, M:F.57, M:W.114, M:W.114, M:L.118, M:M.192
- Hydrogen bonds: M:P.54, M:Q.100, M:Q.100
DD6.136: 19 residues within 4Å:- Chain M: M.91, F.94, I.95, F.164, D.165, P.166, A.167, F.169, N.187, L.190, A.191, G.194, S.197, V.208, L.210, L.211
- Ligands: CLA.145, KC1.146, CLA.147
13 PLIP interactions:13 interactions with chain M- Hydrophobic interactions: M:M.91, M:F.94, M:F.94, M:I.95, M:F.164, M:L.190, M:A.191, M:L.210, M:L.210, M:L.211
- Hydrogen bonds: M:D.165, M:A.167, M:S.197
DD6.150: 18 residues within 4Å:- Chain N: K.147, R.150, L.151, L.154, E.182, P.183, W.184
- Chain O: G.90, Q.94, W.98
- Ligands: CLA.149, DD6.154, CLA.155, CLA.156, CLA.157, CLA.164, CLA.165, CLA.177
11 PLIP interactions:3 interactions with chain O, 8 interactions with chain N- Hydrophobic interactions: O:Q.94, O:W.98, N:R.150, N:L.151, N:L.151, N:L.154, N:W.184, N:W.184
- Hydrogen bonds: O:F.89, N:R.150, N:W.184
DD6.151: 16 residues within 4Å:- Chain N: K.46, R.49, V.50, M.53, I.64, G.65, A.66, Y.67, P.68, F.91, I.98, E.99, L.123
- Ligands: CLA.159, CLA.161, CLA.162
10 PLIP interactions:10 interactions with chain N- Hydrophobic interactions: N:R.49, N:V.50, N:M.53, N:I.64, N:Y.67, N:Y.67, N:P.68, N:F.91, N:F.91, N:I.98
DD6.152: 23 residues within 4Å:- Chain N: F.26, D.27, P.28, I.29, G.30, F.31, H.47, V.50, C.51, A.54, F.58, Q.61, S.76, A.79, V.80, M.153, F.156, S.157
- Ligands: DD6.154, CLA.157, CLA.158, CLA.159, CLA.161
10 PLIP interactions:10 interactions with chain N- Hydrophobic interactions: N:F.26, N:P.28, N:I.29, N:V.50, N:F.156, N:F.156
- Hydrogen bonds: N:I.29, N:G.30, N:Q.61, N:S.76
DD6.153: 17 residues within 4Å:- Chain N: M.52, M.53, T.55, V.56, W.125, G.126, R.129, N.148, L.151, A.152, A.155, M.159, L.173
- Ligands: CLA.162, KC1.163, CLA.164, KC1.356
9 PLIP interactions:9 interactions with chain N- Hydrophobic interactions: N:M.52, N:T.55, N:V.56, N:L.151, N:L.151, N:A.152, N:A.155
- Hydrogen bonds: N:R.129, N:R.129
DD6.154: 17 residues within 4Å:- Chain N: L.77, Y.81, L.154, F.156, S.157, V.160, H.161, I.164
- Chain O: W.98, I.101
- Ligands: DD6.150, DD6.152, CLA.155, CLA.157, CLA.158, CLA.164, CLA.165
9 PLIP interactions:8 interactions with chain N, 1 interactions with chain O- Hydrophobic interactions: N:L.77, N:L.154, N:F.156, N:V.160, N:V.160, N:I.164, O:I.101
- Hydrogen bonds: N:Y.81, N:Y.81
DD6.167: 21 residues within 4Å:- Chain O: E.27, R.147, R.150, L.151, L.154, L.165
- Chain S: D.102, A.103, G.104, F.107, Q.108, L.111, F.112
- Ligands: DD6.171, CLA.172, CLA.173, CLA.174, CLA.181, CLA.183, CLA.242, LMG.379
9 PLIP interactions:5 interactions with chain O, 4 interactions with chain S- Hydrophobic interactions: O:L.151, O:L.154, O:L.165, S:F.107, S:Q.108, S:L.111, S:F.112
- Hydrogen bonds: O:R.147, O:R.150
DD6.168: 21 residues within 4Å:- Chain N: T.179, G.180
- Chain O: K.49, R.52, I.53, L.56, L.70, P.71, G.72, P.73, Y.75, F.89, I.95, L.99, I.102, E.103
- Ligands: CLA.164, CLA.176, CLA.177, CLA.178, CLA.179
10 PLIP interactions:10 interactions with chain O- Hydrophobic interactions: O:K.49, O:R.52, O:I.53, O:I.53, O:L.56, O:L.70, O:F.89, O:I.95, O:L.99, O:I.102
DD6.169: 22 residues within 4Å:- Chain O: F.29, D.30, P.31, M.32, F.34, H.50, I.53, C.54, A.57, W.61, T.79, A.82, H.83, M.153, F.156, S.157
- Chain S: C.119
- Ligands: DD6.171, CLA.174, CLA.175, CLA.176, CLA.182
11 PLIP interactions:11 interactions with chain O- Hydrophobic interactions: O:F.29, O:P.31, O:F.34, O:A.57, O:H.83, O:F.156, O:F.156, O:F.156
- Hydrogen bonds: O:M.32, O:G.33, O:T.79
DD6.170: 18 residues within 4Å:- Chain O: M.55, T.58, V.59, L.127, R.129, N.148, L.151, A.152, A.155, I.159, W.170, P.171, F.172
- Chain X: L.99
- Ligands: CLA.179, KC1.180, CLA.181, CLA.327
11 PLIP interactions:1 interactions with chain X, 10 interactions with chain O- Hydrophobic interactions: X:L.99, O:M.55, O:T.58, O:V.59, O:L.127, O:L.151, O:A.152, O:A.155, O:I.159, O:W.170
- Hydrogen bonds: O:P.171
DD6.171: 18 residues within 4Å:- Chain O: L.80, H.83, D.84, F.156, S.157, V.160, V.164
- Chain S: I.115
- Ligands: DD6.167, DD6.169, CLA.172, CLA.174, CLA.175, CLA.181, CLA.182, CLA.183, CLA.242, LMG.379
7 PLIP interactions:5 interactions with chain O, 2 interactions with chain S- Hydrophobic interactions: O:F.156, O:V.160, O:V.160, O:V.164, S:I.115, S:I.115
- Hydrogen bonds: O:D.84
DD6.186: 13 residues within 4Å:- Chain O: M.32
- Chain S: L.118, A.121, K.122, F.125
- Ligands: CLA.16, BCR.34, BCR.35, LMG.92, LMG.166, CLA.240, CLA.243, CLA.247
7 PLIP interactions:7 interactions with chain S- Hydrophobic interactions: S:L.118, S:A.121, S:F.125, S:F.125, S:F.125
- Hydrogen bonds: S:K.122, S:K.122
DD6.187: 8 residues within 4Å:- Chain P: P.10, N.148, R.151, L.152, M.155
- Ligands: CLA.193, CLA.194, CLA.201
5 PLIP interactions:5 interactions with chain P- Hydrophobic interactions: P:N.148, P:R.151, P:L.152, P:L.152, P:M.155
DD6.189: 19 residues within 4Å:- Chain P: D.15, P.16, L.17, G.18, V.41, A.45, W.49, G.75, M.76, A.78, W.87, M.154, M.155, I.157, T.158
- Ligands: CLA.101, CLA.194, KC1.195, CLA.196
13 PLIP interactions:13 interactions with chain P- Hydrophobic interactions: P:P.16, P:L.17, P:V.41, P:A.45, P:W.87, P:M.154, P:I.157, P:I.157
- Hydrogen bonds: P:D.15, P:L.17, P:G.18, P:G.75, P:G.75
DD6.203: 9 residues within 4Å:- Chain Q: G.12, P.13, R.148, L.149
- Chain W: A.85, L.86
- Ligands: CLA.207, CLA.208, CLA.215
3 PLIP interactions:2 interactions with chain W, 1 interactions with chain Q- Hydrophobic interactions: W:A.85, W:L.86
- Hydrogen bonds: Q:G.12
DD6.204: 12 residues within 4Å:- Chain Q: K.42, I.46, L.64, L.67, W.68, F.95, I.96, L.99, E.100
- Ligands: CLA.210, CLA.211, CLA.213
9 PLIP interactions:9 interactions with chain Q- Hydrophobic interactions: Q:K.42, Q:I.46, Q:L.64, Q:L.67, Q:W.68, Q:F.95, Q:I.96, Q:I.96, Q:L.99
DD6.205: 18 residues within 4Å:- Chain Q: W.19, D.20, P.21, A.22, F.24, H.43, I.46, A.50, W.54, P.77, I.78, F.81, M.151, I.154, I.155
- Ligands: CLA.208, CLA.209, CLA.210
12 PLIP interactions:12 interactions with chain Q- Hydrophobic interactions: Q:W.19, Q:W.19, Q:A.22, Q:A.50, Q:I.78, Q:F.81, Q:M.151, Q:I.154, Q:I.154
- Hydrogen bonds: Q:D.20, Q:A.22, Q:P.77
DD6.217: 12 residues within 4Å:- Chain R: K.141, R.144, L.145, L.148, F.159, W.160
- Ligands: DD6.220, KC1.221, CLA.222, CLA.223, CLA.229, CLA.231
8 PLIP interactions:8 interactions with chain R- Hydrophobic interactions: R:R.144, R:L.145, R:L.145, R:L.148, R:F.159, R:W.160
- Hydrogen bonds: R:K.141, R:K.141
DD6.218: 18 residues within 4Å:- Chain R: W.19, D.20, P.21, V.22, G.23, F.24, H.42, I.45, A.49, F.73, A.76, M.147, F.154
- Ligands: DD6.220, CLA.223, CLA.224, CLA.225, CLA.230
11 PLIP interactions:11 interactions with chain R- Hydrophobic interactions: R:W.19, R:W.19, R:V.22, R:F.24, R:A.49, R:M.147, R:F.154
- Hydrogen bonds: R:D.20, R:V.22, R:G.23, R:F.73
DD6.219: 16 residues within 4Å:- Chain R: M.47, F.50, F.123, Y.135, N.142, L.145, A.146, A.149, I.153, F.165, P.166, F.167
- Ligands: CLA.227, KC1.228, CLA.229, PID.300
12 PLIP interactions:12 interactions with chain R- Hydrophobic interactions: R:M.47, R:F.50, R:F.50, R:F.123, R:F.123, R:F.123, R:L.145, R:L.145, R:A.146, R:A.149, R:I.153
- Hydrogen bonds: R:P.166
DD6.220: 16 residues within 4Å:- Chain R: W.19, A.74, H.77, D.78, L.148, S.151, F.154, I.158
- Ligands: DD6.217, DD6.218, KC1.221, CLA.223, CLA.229, CLA.230, CLA.231, DD6.232
7 PLIP interactions:7 interactions with chain R- Hydrophobic interactions: R:W.19, R:H.77, R:L.148, R:F.154, R:F.154, R:I.158
- Hydrogen bonds: R:D.78
DD6.232: 14 residues within 4Å:- Chain S: K.158, R.161, L.162, I.165, I.176
- Ligands: DD6.220, CLA.230, CLA.231, DD6.236, KC1.237, CLA.238, CLA.239, CLA.246, CLA.248
7 PLIP interactions:7 interactions with chain S- Hydrophobic interactions: S:R.161, S:L.162, S:L.162, S:I.165, S:I.165, S:I.176
- Hydrogen bonds: S:R.161
DD6.234: 20 residues within 4Å:- Chain S: F.38, D.39, P.40, I.41, G.42, F.43, H.60, I.63, A.67, L.71, V.92, A.95, H.96, M.164, F.167
- Ligands: DD6.236, CLA.239, CLA.240, CLA.241, CLA.247
14 PLIP interactions:14 interactions with chain S- Hydrophobic interactions: S:F.38, S:F.38, S:P.40, S:I.41, S:I.41, S:A.67, S:M.164, S:F.167, S:F.167
- Hydrogen bonds: S:D.39, S:I.41, S:G.42, S:V.92, S:H.96
DD6.235: 17 residues within 4Å:- Chain S: M.65, W.68, L.69, L.138, R.140, L.141, N.159, L.162, A.163, A.166, G.169, Q.173, W.183
- Ligands: CLA.244, KC1.245, CLA.246, KC1.389
12 PLIP interactions:12 interactions with chain S- Hydrophobic interactions: S:M.65, S:W.68, S:L.69, S:L.162, S:L.162, S:A.163, S:A.166, S:W.183
- Hydrogen bonds: S:L.138, S:Q.173, S:Q.173, S:W.183
DD6.236: 16 residues within 4Å:- Chain S: Y.36, F.38, H.96, D.97, F.167, G.168, V.171
- Ligands: CLA.16, DD6.232, DD6.234, KC1.237, CLA.239, CLA.240, CLA.246, CLA.247, CLA.248
5 PLIP interactions:5 interactions with chain S- Hydrophobic interactions: S:H.96, S:F.167, S:V.171
- Hydrogen bonds: S:Y.36, S:D.97
DD6.249: 13 residues within 4Å:- Chain L: K.153, R.156, L.157, L.160, L.171
- Chain T: Y.64
- Ligands: DD6.113, KC1.114, CLA.115, CLA.116, CLA.123, CLA.125, PID.251
8 PLIP interactions:7 interactions with chain L, 1 interactions with chain T- Hydrophobic interactions: L:L.157, L:L.160, L:L.160, L:L.171
- Hydrogen bonds: L:K.153, L:K.153, L:R.156, T:Y.64
DD6.252: 19 residues within 4Å:- Chain T: F.14, D.15, P.16, L.17, G.18, V.41, A.45, Y.49, G.76, A.79, M.80, M.143, I.146, I.147, F.150
- Ligands: KC1.143, CLA.257, KC1.258, CLA.259
15 PLIP interactions:15 interactions with chain T- Hydrophobic interactions: T:F.14, T:V.41, T:A.45, T:Y.49, T:M.143, T:I.146, T:I.146, T:I.147, T:F.150
- Hydrogen bonds: T:F.14, T:D.15, T:L.17, T:G.18, T:G.76, T:G.76
DD6.265: 17 residues within 4Å:- Chain L: G.84, T.87, Q.88, I.91
- Chain U: K.24, E.146, R.149, L.150, L.153, L.164
- Ligands: CLA.119, LMG.128, DD6.269, CLA.271, CLA.272, CLA.278, CLA.280
11 PLIP interactions:7 interactions with chain U, 4 interactions with chain L- Hydrophobic interactions: U:L.150, U:L.153, U:L.153, U:L.164, L:T.87, L:Q.88, L:I.91
- Hydrogen bonds: U:K.24, U:E.146, U:R.149, L:Q.88
DD6.266: 17 residues within 4Å:- Chain U: K.46, R.49, I.50, L.53, W.65, F.67, E.68, M.93, V.97, C.100, E.101, Y.123
- Ligands: CLA.274, CLA.275, CLA.276, DD6.397, CLA.409
12 PLIP interactions:12 interactions with chain U- Hydrophobic interactions: U:K.46, U:I.50, U:I.50, U:W.65, U:W.65, U:F.67, U:E.68, U:V.97, U:V.97
- Hydrogen bonds: U:E.68, U:E.68, U:Y.123
DD6.267: 21 residues within 4Å:- Chain U: F.26, D.27, P.28, L.29, H.47, I.50, C.51, A.54, W.58, V.77, A.80, H.81, M.152, F.155, S.156
- Ligands: DD6.269, CLA.272, CLA.273, CLA.274, CLA.275, CLA.279
9 PLIP interactions:9 interactions with chain U- Hydrophobic interactions: U:F.26, U:F.26, U:P.28, U:A.54, U:F.155, U:F.155
- Hydrogen bonds: U:D.27, U:L.29, U:V.77
DD6.269: 15 residues within 4Å:- Chain U: I.78, N.82, F.155, S.156, C.159, N.163
- Ligands: LMG.128, DD6.265, DD6.267, CLA.270, CLA.272, CLA.273, CLA.278, CLA.279, CLA.280
2 PLIP interactions:2 interactions with chain U- Hydrophobic interactions: U:F.155
- Hydrogen bonds: U:N.82
DD6.283: 15 residues within 4Å:- Chain 2: L.46, W.49, F.50, L.101
- Chain K: S.27, A.30, L.31, I.34
- Chain U: S.95, I.96, V.99
- Ligands: BCR.109, SQD.281, CLA.403, CLA.410
12 PLIP interactions:6 interactions with chain 2, 3 interactions with chain K, 3 interactions with chain U- Hydrophobic interactions: 2:L.46, 2:L.46, 2:W.49, 2:F.50, 2:L.101, 2:L.101, K:A.30, K:L.31, U:I.96, U:V.99, U:V.99
- Hydrogen bonds: K:S.27
DD6.286: 20 residues within 4Å:- Chain V: W.14, D.15, P.16, L.17, F.19, H.38, I.41, A.45, Y.49, G.76, A.79, I.80, W.88, M.143, M.144, F.146, T.147
- Ligands: CLA.291, KC1.292, CLA.293
16 PLIP interactions:16 interactions with chain V- Hydrophobic interactions: V:W.14, V:L.17, V:L.17, V:I.41, V:A.45, V:Y.49, V:I.80, V:M.143, V:F.146, V:F.146, V:T.147
- Hydrogen bonds: V:D.15, V:L.17, V:G.18, V:G.76, V:G.76
DD6.301: 18 residues within 4Å:- Chain W: W.14, D.15, P.16, V.17, G.18, I.41, A.45, Y.49, N.75, A.79, I.80, M.143, M.144, F.146, T.147
- Ligands: CLA.307, KC1.308, CLA.309
9 PLIP interactions:9 interactions with chain W- Hydrophobic interactions: W:W.14, W:P.16, W:Y.49, W:I.80, W:M.143, W:F.146, W:F.146
- Hydrogen bonds: W:V.17, W:G.18
DD6.317: 17 residues within 4Å:- Chain X: D.14, P.15, L.16, G.17, S.19, I.40, A.44, G.75, A.78, W.87, M.144, I.147, I.148, F.151
- Ligands: CLA.323, KC1.324, CLA.325
9 PLIP interactions:9 interactions with chain X- Hydrophobic interactions: X:A.44, X:W.87, X:I.147, X:I.147, X:F.151, X:F.151
- Hydrogen bonds: X:G.17, X:G.75, X:G.75
DD6.333: 19 residues within 4Å:- Chain Y: F.14, D.15, P.16, K.18, I.41, A.45, Y.49, G.76, L.77, A.79, V.80, M.143, M.144, I.146, I.147, F.150
- Ligands: CLA.339, KC1.340, CLA.341
11 PLIP interactions:11 interactions with chain Y- Hydrophobic interactions: Y:F.14, Y:I.41, Y:Y.49, Y:L.77, Y:V.80, Y:M.143, Y:I.146, Y:I.147, Y:F.150, Y:F.150
- Hydrogen bonds: Y:G.76
DD6.349: 20 residues within 4Å:- Chain Z: W.14, D.15, P.16, L.17, F.19, I.41, A.45, Y.49, G.76, A.79, I.80, W.88, M.145, M.146, I.148, I.149, F.152
- Ligands: CLA.355, KC1.356, CLA.357
16 PLIP interactions:16 interactions with chain Z- Hydrophobic interactions: Z:W.14, Z:L.17, Z:L.17, Z:F.19, Z:I.41, Z:A.45, Z:Y.49, Z:I.80, Z:M.145, Z:I.149, Z:F.152
- Hydrogen bonds: Z:D.15, Z:L.17, Z:L.17, Z:G.76, Z:L.77
DD6.365: 19 residues within 4Å:- Chain 0: F.14, D.15, P.16, L.17, K.18, I.41, A.45, G.76, L.77, A.79, W.88, M.143, M.144, I.146, I.147, F.150
- Ligands: CLA.371, KC1.372, CLA.373
15 PLIP interactions:15 interactions with chain 0- Hydrophobic interactions: 0:F.14, 0:P.16, 0:I.41, 0:A.45, 0:L.77, 0:W.88, 0:M.143, 0:I.146, 0:I.147, 0:F.150, 0:F.150
- Hydrogen bonds: 0:L.17, 0:L.17, 0:G.76, 0:G.76
DD6.382: 21 residues within 4Å:- Chain 1: W.14, D.15, P.16, L.17, G.18, I.41, A.45, Y.49, G.76, A.79, I.80, W.88, M.143, M.144, I.146, I.147, F.150
- Ligands: CLA.388, KC1.389, CLA.390, CLA.392
11 PLIP interactions:11 interactions with chain 1- Hydrophobic interactions: 1:D.15, 1:A.45, 1:Y.49, 1:W.88, 1:I.146, 1:I.147, 1:F.150, 1:F.150
- Hydrogen bonds: 1:L.17, 1:G.76, 1:G.76
DD6.397: 14 residues within 4Å:- Chain 2: K.32, R.35, C.36, I.39, L.76, I.80, E.84, F.99
- Ligands: DD6.266, CLA.403, CLA.405, CLA.406, CLA.409, CLA.410
6 PLIP interactions:6 interactions with chain 2- Hydrophobic interactions: 2:I.39, 2:L.76, 2:I.80, 2:I.80
- Hydrogen bonds: 2:K.32, 2:K.32
DD6.398: 16 residues within 4Å:- Chain 2: F.12, D.13, P.14, L.15, H.33, A.40, Y.44, G.61, A.64, L.65, W.73, M.129, F.132
- Ligands: CLA.401, KC1.402, CLA.403
10 PLIP interactions:10 interactions with chain 2- Hydrophobic interactions: 2:F.12, 2:A.40, 2:L.65, 2:M.129, 2:F.132, 2:F.132, 2:F.132
- Hydrogen bonds: 2:L.15, 2:L.15, 2:G.61
- 49 x PID: PERIDININ(Non-covalent)
PID.85: 18 residues within 4Å:- Chain G: N.67, E.84, L.114, P.115, S.117, F.118, H.121, C.124, K.128
- Chain M: W.140
- Chain T: L.100, S.101
- Ligands: CLA.69, CLA.81, DD6.83, LMG.86, PID.131, CLA.132
3 PLIP interactions:3 interactions with chain G- Hydrophobic interactions: G:L.114, G:F.118, G:H.121
PID.91: 19 residues within 4Å:- Chain A: S.90, I.92
- Chain I: Y.38, V.44, M.47, S.54, I.58, E.59, R.62
- Chain N: G.187, S.188, I.189
- Ligands: CLA.4, CLA.8, CLA.10, CLA.12, CLA.31, BCR.38, CLA.94
6 PLIP interactions:2 interactions with chain N, 2 interactions with chain A, 2 interactions with chain I- Hydrophobic interactions: N:I.189, A:I.92, A:I.92, I:V.44, I:R.62
- Hydrogen bonds: N:G.187
PID.131: 12 residues within 4Å:- Chain B: L.222, S.225
- Chain M: S.135
- Ligands: CLA.51, CLA.69, DGD.71, CLA.81, DGD.84, PID.85, CLA.130, CLA.132, CLA.144
2 PLIP interactions:1 interactions with chain M, 1 interactions with chain B- Hydrogen bonds: M:S.135
- Hydrophobic interactions: B:L.222
PID.137: 9 residues within 4Å:- Chain M: V.72, Y.73, P.74, W.114, W.151, F.203
- Ligands: CLA.130, PID.138, CLA.141
6 PLIP interactions:6 interactions with chain M- Hydrophobic interactions: M:Y.73, M:W.114, M:W.114, M:W.151, M:W.151, M:F.203
PID.138: 14 residues within 4Å:- Chain M: W.18, P.20, I.21, W.78, W.114, S.115, L.118, Y.146, W.151
- Ligands: CLA.132, DD6.135, PID.137, CLA.141, CLA.144
5 PLIP interactions:5 interactions with chain M- Hydrophobic interactions: M:W.18, M:P.20, M:W.78, M:W.151
- Hydrogen bonds: M:S.115
PID.188: 20 residues within 4Å:- Chain P: K.37, R.40, V.41, W.44, E.60, L.61, P.63, F.69, M.90, F.93, V.94, L.97, E.98, L.102, F.113
- Ligands: PID.192, CLA.196, CLA.197, CLA.198, CLA.199
12 PLIP interactions:12 interactions with chain P- Hydrophobic interactions: P:K.37, P:P.63, P:F.69, P:F.93, P:F.93, P:V.94, P:V.94, P:L.97, P:L.97, P:E.98, P:L.102
- pi-Stacking: P:W.44
PID.190: 18 residues within 4Å:- Chain P: M.43, W.44, C.46, M.47, I.50, Y.119, G.120, F.121, P.122, L.152, A.153, A.156, M.160, W.175
- Ligands: PID.192, CLA.199, KC1.200, CLA.201
8 PLIP interactions:8 interactions with chain P- Hydrophobic interactions: P:M.43, P:W.44, P:Y.119, P:P.122, P:L.152, P:A.153, P:A.156
- Hydrogen bonds: P:Y.119
PID.192: 13 residues within 4Å:- Chain P: W.44, F.93, L.97, L.102, G.120, P.122, F.124, F.125
- Ligands: PID.188, PID.190, CLA.197, CLA.199, CLA.202
6 PLIP interactions:6 interactions with chain P- Hydrophobic interactions: P:W.44, P:F.93, P:L.102, P:F.124, P:F.125
- Hydrogen bonds: P:G.120
PID.250: 9 residues within 4Å:- Chain T: Q.8, P.10, A.137, R.140, L.141, M.144
- Ligands: CLA.256, CLA.257, CLA.264
3 PLIP interactions:3 interactions with chain T- Hydrophobic interactions: T:P.10, T:R.140
- Hydrogen bonds: T:Q.8
PID.251: 19 residues within 4Å:- Chain T: K.37, R.40, V.41, L.44, Y.61, L.62, Y.64, F.70, V.91, Y.94, C.98, E.99, F.115
- Ligands: DD6.249, PID.253, CLA.259, CLA.260, CLA.261, CLA.262
10 PLIP interactions:10 interactions with chain T- Hydrophobic interactions: T:L.44, T:Y.64, T:F.70, T:F.70, T:V.91, T:V.91, T:E.99
- Hydrogen bonds: T:R.40, T:Y.61, T:L.62
PID.253: 17 residues within 4Å:- Chain T: L.44, M.47, M.50, T.51, T.55, Y.94, C.98, S.101, Q.102, F.115, F.117
- Ligands: PID.251, PID.254, PID.255, CLA.259, CLA.262, KC1.263
5 PLIP interactions:5 interactions with chain T- Hydrophobic interactions: T:L.44, T:F.115, T:F.117
- Hydrogen bonds: T:S.101, T:S.101
PID.254: 17 residues within 4Å:- Chain T: M.43, T.46, M.47, M.50, F.117, V.119, I.120, N.138, L.141, A.145, L.149, Q.152
- Ligands: PID.253, PID.255, CLA.262, KC1.263, CLA.264
9 PLIP interactions:9 interactions with chain T- Hydrophobic interactions: T:M.43, T:F.117, T:F.117, T:V.119, T:I.120, T:I.120, T:L.141, T:A.145
- Hydrogen bonds: T:Q.152
PID.255: 6 residues within 4Å:- Chain T: M.50, I.54, Y.160
- Ligands: PID.253, PID.254, KC1.263
No protein-ligand interaction detected (PLIP)PID.284: 9 residues within 4Å:- Chain V: Q.8, P.10, T.11, R.140, L.141, M.144
- Ligands: CLA.290, CLA.291, CLA.298
4 PLIP interactions:4 interactions with chain V- Hydrophobic interactions: V:P.10, V:T.11, V:R.140, V:L.141
PID.285: 17 residues within 4Å:- Chain V: K.37, R.40, I.41, L.44, L.62, P.64, Y.70, I.91, Y.94, C.95, A.98, E.99, F.115
- Ligands: CLA.293, KC1.294, CLA.295, CLA.296
8 PLIP interactions:8 interactions with chain V- Hydrophobic interactions: V:K.37, V:R.40, V:I.41, V:L.44, V:I.91, V:Y.94, V:A.98
- Hydrogen bonds: V:K.37
PID.287: 14 residues within 4Å:- Chain V: M.47, I.50, T.51, I.54, Y.94, A.98, S.101, Q.102, F.115, F.117
- Ligands: PID.288, PID.289, CLA.293, CLA.296
5 PLIP interactions:5 interactions with chain V- Hydrophobic interactions: V:I.50, V:I.54, V:F.115
- Hydrogen bonds: V:S.101, V:Q.102
PID.288: 16 residues within 4Å:- Chain V: M.43, T.46, M.47, F.117, V.119, L.141, A.145, G.148, M.149, Q.152, W.160
- Ligands: PID.287, PID.289, CLA.296, KC1.297, CLA.298
3 PLIP interactions:3 interactions with chain V- Hydrophobic interactions: V:F.117, V:V.119, V:A.145
PID.289: 8 residues within 4Å:- Chain V: I.50, E.53, I.54, L.120, W.160
- Ligands: PID.287, PID.288, KC1.297
1 PLIP interactions:1 interactions with chain V- Hydrophobic interactions: V:L.120
PID.299: 8 residues within 4Å:- Chain W: Q.8, V.11, R.140, L.141, M.144
- Ligands: CLA.306, CLA.307, CLA.314
4 PLIP interactions:4 interactions with chain W- Hydrophobic interactions: W:V.11, W:R.140
- Hydrogen bonds: W:Q.8, W:R.140
PID.300: 20 residues within 4Å:- Chain R: F.165, P.166, I.168
- Chain W: K.37, R.40, I.41, L.44, L.62, P.64, Y.70, I.91, Y.94, C.95, A.98, E.99, F.115
- Ligands: DD6.219, CLA.309, KC1.310, CLA.311
9 PLIP interactions:1 interactions with chain R, 8 interactions with chain W- Hydrophobic interactions: R:I.168, W:I.41, W:L.44, W:P.64, W:I.91, W:Y.94, W:A.98, W:E.99
- Hydrogen bonds: W:R.40
PID.302: 15 residues within 4Å:- Chain W: L.44, M.47, M.50, T.51, Y.94, Y.97, A.98, S.101, Q.102, F.115, F.117
- Ligands: CLA.222, PID.303, CLA.309, CLA.312
8 PLIP interactions:8 interactions with chain W- Hydrophobic interactions: W:L.44, W:T.51, W:A.98, W:F.115, W:F.117, W:F.117, W:F.117
- Hydrogen bonds: W:S.101
PID.303: 16 residues within 4Å:- Chain W: M.43, A.46, M.47, V.119, N.138, L.141, A.142, A.145, M.149, Q.152, W.160
- Ligands: PID.302, PID.305, CLA.312, KC1.313, CLA.314
7 PLIP interactions:7 interactions with chain W- Hydrophobic interactions: W:A.46, W:V.119, W:N.138, W:A.142, W:A.145
- Hydrogen bonds: W:Q.152, W:Q.152
PID.305: 7 residues within 4Å:- Chain W: M.50, E.53, I.54, K.131, W.160
- Ligands: PID.303, KC1.313
2 PLIP interactions:2 interactions with chain W- Hydrophobic interactions: W:E.53, W:I.54
PID.315: 9 residues within 4Å:- Chain X: P.8, P.9, F.12, R.141, L.142, M.145
- Ligands: CLA.322, CLA.323, CLA.330
4 PLIP interactions:4 interactions with chain X- Hydrophobic interactions: X:P.9, X:R.141, X:L.142
- Hydrogen bonds: X:R.141
PID.316: 18 residues within 4Å:- Chain X: K.36, R.39, I.40, L.43, Y.60, L.61, P.63, Y.69, I.90, W.93, T.94, C.97, E.98, F.114
- Ligands: CLA.325, KC1.326, CLA.327, CLA.328
10 PLIP interactions:10 interactions with chain X- Hydrophobic interactions: X:K.36, X:R.39, X:L.61, X:P.63, X:I.90, X:I.90, X:T.94, X:E.98
- Hydrogen bonds: X:K.36, X:R.39
PID.318: 16 residues within 4Å:- Chain X: L.43, M.49, T.50, I.53, T.54, W.93, C.97, W.100, E.101, F.114, C.115, F.116
- Ligands: PID.319, PID.321, CLA.325, CLA.328
9 PLIP interactions:9 interactions with chain X- Hydrophobic interactions: X:L.43, X:I.53, X:T.54, X:W.93, X:F.114, X:F.116, X:F.116, X:F.116
- Hydrogen bonds: X:W.100
PID.319: 18 residues within 4Å:- Chain X: M.42, A.45, M.46, M.49, F.116, F.119, N.139, L.142, A.143, A.146, L.150, Q.153, Y.161
- Ligands: PID.318, PID.321, CLA.328, KC1.329, CLA.330
9 PLIP interactions:9 interactions with chain X- Hydrophobic interactions: X:M.42, X:A.45, X:F.116, X:F.119, X:A.143, X:A.146, X:L.150
- Hydrogen bonds: X:Q.153, X:Q.153
PID.321: 10 residues within 4Å:- Chain X: M.49, E.52, I.53, K.132, Y.161
- Chain Y: L.17
- Ligands: PID.318, PID.319, KC1.329, UIX.336
3 PLIP interactions:3 interactions with chain X- Hydrophobic interactions: X:E.52, X:I.53, X:Y.161
PID.331: 10 residues within 4Å:- Chain Y: Q.8, A.9, P.10, L.11, R.140, L.141, M.144
- Ligands: CLA.338, CLA.339, CLA.346
4 PLIP interactions:4 interactions with chain Y- Hydrophobic interactions: Y:A.9, Y:L.11, Y:R.140
- Hydrogen bonds: Y:Q.8
PID.332: 18 residues within 4Å:- Chain Y: K.37, R.40, I.41, L.44, Y.61, L.62, F.70, I.91, Y.94, M.95, C.98, E.99, F.115
- Ligands: PID.334, CLA.341, KC1.342, CLA.343, CLA.344
8 PLIP interactions:8 interactions with chain Y- Hydrophobic interactions: Y:K.37, Y:R.40, Y:L.44, Y:L.62, Y:F.70, Y:F.70, Y:I.91
- Hydrogen bonds: Y:Q.104
PID.334: 17 residues within 4Å:- Chain Y: L.44, M.47, T.51, I.54, T.55, Y.94, Y.97, C.98, S.101, Q.102, F.115, F.117
- Ligands: PID.332, PID.335, PID.337, CLA.341, CLA.344
5 PLIP interactions:5 interactions with chain Y- Hydrophobic interactions: Y:L.44, Y:T.51, Y:F.117
- Hydrogen bonds: Y:S.101, Y:Q.102
PID.335: 16 residues within 4Å:- Chain Y: M.43, A.46, M.47, M.50, F.117, V.119, I.120, L.141, A.145, M.149, Q.152, W.160
- Ligands: PID.334, CLA.344, KC1.345, CLA.346
9 PLIP interactions:9 interactions with chain Y- Hydrophobic interactions: Y:M.43, Y:A.46, Y:F.117, Y:F.117, Y:I.120, Y:L.141, Y:A.145, Y:W.160
- Hydrogen bonds: Y:Q.152
PID.337: 7 residues within 4Å:- Chain Y: M.50, E.53, I.120, K.131, W.160
- Ligands: PID.334, KC1.345
1 PLIP interactions:1 interactions with chain Y- Hydrophobic interactions: Y:W.160
PID.347: 13 residues within 4Å:- Chain Y: T.55, G.56, F.58, P.59
- Chain Z: Q.8, P.10, V.11, A.139, L.143, M.146
- Ligands: CLA.354, CLA.355, CLA.362
5 PLIP interactions:5 interactions with chain Z- Hydrophobic interactions: Z:P.10, Z:P.10, Z:V.11, Z:L.143
- Hydrogen bonds: Z:R.142
PID.348: 18 residues within 4Å:- Chain 0: A.85
- Chain Z: K.37, R.40, I.41, L.44, L.62, P.64, F.70, W.94, M.95, C.98, E.99, Q.104, M.115
- Ligands: PID.350, CLA.357, KC1.358, CLA.360
9 PLIP interactions:8 interactions with chain Z, 1 interactions with chain 0- Hydrophobic interactions: Z:K.37, Z:R.40, Z:I.41, Z:L.44, Z:F.70, Z:M.95, Z:E.99, 0:A.85
- Hydrogen bonds: Z:Q.104
PID.350: 16 residues within 4Å:- Chain Z: M.47, I.50, T.51, V.54, T.55, W.94, C.98, S.101, V.102, M.115, F.117
- Ligands: PID.348, PID.351, PID.353, CLA.357, CLA.360
7 PLIP interactions:7 interactions with chain Z- Hydrophobic interactions: Z:T.55, Z:W.94, Z:V.102, Z:M.115, Z:F.117
- Hydrogen bonds: Z:S.101
- pi-Stacking: Z:F.117
PID.351: 21 residues within 4Å:- Chain Z: M.43, A.46, M.47, I.50, F.117, A.119, F.120, N.140, L.143, A.144, A.147, M.151, Q.154, W.162
- Ligands: PID.350, CLA.357, CLA.360, KC1.361, CLA.362, UIX.368, KC1.372
10 PLIP interactions:10 interactions with chain Z- Hydrophobic interactions: Z:M.43, Z:A.46, Z:I.50, Z:F.117, Z:F.120, Z:L.143, Z:A.144, Z:A.147, Z:W.162
- Hydrogen bonds: Z:Q.154
PID.353: 9 residues within 4Å:- Chain Z: I.50, E.53, V.54, K.133, W.162
- Ligands: PID.350, KC1.361, UIX.368, CLA.371
4 PLIP interactions:4 interactions with chain Z- Hydrophobic interactions: Z:I.50, Z:E.53, Z:V.54, Z:W.162
PID.363: 9 residues within 4Å:- Chain 0: Q.8, P.10, L.11, R.140, L.141, M.144
- Ligands: CLA.370, CLA.371, CLA.378
3 PLIP interactions:3 interactions with chain 0- Hydrophobic interactions: 0:P.10, 0:L.11, 0:R.140
PID.364: 19 residues within 4Å:- Chain 0: K.37, R.40, I.41, L.44, L.62, S.63, P.64, F.70, I.91, Y.94, M.95, C.98, E.99, F.115
- Chain M: Y.103
- Ligands: PID.366, CLA.373, KC1.374, CLA.376
9 PLIP interactions:8 interactions with chain 0, 1 interactions with chain M- Hydrophobic interactions: 0:R.40, 0:L.44, 0:P.64, 0:F.70, 0:I.91, 0:Y.94, 0:E.99
- Hydrogen bonds: 0:E.99, M:Y.103
PID.366: 18 residues within 4Å:- Chain 0: L.44, M.47, M.50, T.51, I.54, T.55, Y.94, C.98, S.101, Q.102, F.115, F.117
- Ligands: PID.364, PID.367, PID.369, CLA.373, CLA.376, KC1.377
7 PLIP interactions:7 interactions with chain 0- Hydrophobic interactions: 0:L.44, 0:I.54, 0:I.54, 0:F.117
- Hydrogen bonds: 0:S.101, 0:S.101, 0:Q.102
PID.367: 18 residues within 4Å:- Chain 0: M.43, A.46, M.47, M.50, F.117, V.119, I.120, N.138, L.141, A.142, A.145, Q.152, W.160
- Ligands: PID.366, PID.369, CLA.376, KC1.377, CLA.378
7 PLIP interactions:7 interactions with chain 0- Hydrophobic interactions: 0:M.43, 0:A.46, 0:A.142, 0:A.145, 0:W.160
- Hydrogen bonds: 0:Q.152, 0:Q.152
PID.369: 7 residues within 4Å:- Chain 0: E.53, I.54, K.131, W.160
- Ligands: PID.366, PID.367, KC1.377
4 PLIP interactions:4 interactions with chain 0- Hydrophobic interactions: 0:E.53, 0:I.54, 0:I.54, 0:W.160
PID.380: 7 residues within 4Å:- Chain 1: Q.8, R.140, L.141, M.144
- Ligands: CLA.387, CLA.388, CLA.395
1 PLIP interactions:1 interactions with chain 1- Hydrophobic interactions: 1:R.140
PID.381: 16 residues within 4Å:- Chain 1: K.37, R.40, I.41, L.44, L.62, P.64, Y.70, I.91, Y.94, T.95, C.98, E.99, F.115
- Ligands: CLA.390, KC1.391, CLA.393
5 PLIP interactions:5 interactions with chain 1- Hydrophobic interactions: 1:K.37, 1:R.40, 1:I.41, 1:L.44, 1:I.91
PID.383: 16 residues within 4Å:- Chain 1: L.44, M.47, T.51, L.54, T.55, Y.94, Y.97, C.98, S.101, Q.102, F.115, F.117
- Ligands: PID.384, CLA.390, CLA.393, KC1.394
11 PLIP interactions:11 interactions with chain 1- Hydrophobic interactions: 1:L.44, 1:M.47, 1:T.51, 1:L.54, 1:T.55, 1:Y.94, 1:Y.97
- Hydrogen bonds: 1:Y.97, 1:Y.97, 1:S.101, 1:Q.102
PID.384: 19 residues within 4Å:- Chain 1: M.43, T.46, M.47, I.50, F.117, V.119, L.120, N.138, L.141, A.142, A.145, G.148, M.149, Q.152
- Ligands: PID.383, PID.386, CLA.393, KC1.394, CLA.395
8 PLIP interactions:8 interactions with chain 1- Hydrophobic interactions: 1:F.117, 1:V.119, 1:V.119, 1:L.120, 1:L.141, 1:A.142, 1:A.145
- Hydrogen bonds: 1:Q.152
PID.386: 4 residues within 4Å:- Chain 1: L.54, L.120
- Ligands: PID.384, KC1.394
2 PLIP interactions:2 interactions with chain 1- Hydrophobic interactions: 1:L.54, 1:L.120
PID.396: 10 residues within 4Å:- Chain 2: C.5, P.7, N.123, R.126, V.130, F.142
- Ligands: CLA.106, CLA.400, CLA.401, CLA.408
5 PLIP interactions:5 interactions with chain 2- Hydrophobic interactions: 2:P.7, 2:R.126, 2:V.130, 2:F.142
- Hydrogen bonds: 2:N.123
- 12 x UIX: [(1~{S},5~{R})-3,3,5-trimethyl-5-oxidanyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{S},4~{S},6~{R})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenylidene]cyclohexyl] ethanoate(Non-covalent)
UIX.112: 16 residues within 4Å:- Chain L: M.48, W.51, V.52, L.132, G.133, F.136, N.154, L.157, A.161, Q.168, W.178, L.179
- Ligands: CLA.118, CLA.121, KC1.122, CLA.123
10 PLIP interactions:10 interactions with chain L- Hydrophobic interactions: L:M.48, L:W.51, L:V.52, L:L.132, L:F.136, L:L.157, L:L.157, L:A.161
- Hydrogen bonds: L:Q.168, L:W.178
UIX.191: 7 residues within 4Å:- Chain J: W.156, L.248
- Chain P: R.30, R.31, M.76
- Ligands: CLA.105, KC1.195
4 PLIP interactions:2 interactions with chain J, 2 interactions with chain P- Hydrophobic interactions: J:W.156, J:L.248
- Hydrogen bonds: P:R.30
- Salt bridges: P:K.80
UIX.206: 19 residues within 4Å:- Chain J: L.100, V.102, I.104, T.111
- Chain Q: M.48, V.51, V.52, F.55, N.146, L.149, A.150, A.153, L.157, Q.160
- Ligands: CLA.97, CLA.98, CLA.213, KC1.214, CLA.215
12 PLIP interactions:10 interactions with chain Q, 2 interactions with chain J- Hydrophobic interactions: Q:M.48, Q:V.51, Q:V.52, Q:F.55, Q:L.149, Q:A.150, Q:A.153, Q:L.157, J:I.104, J:T.111
- Hydrogen bonds: Q:Q.160, Q:Q.160
UIX.233: 17 residues within 4Å:- Chain S: K.59, R.62, I.63, L.66, I.79, P.80, G.81, Y.84, I.109, I.113, V.116, E.117, Y.136
- Ligands: CLA.241, CLA.242, CLA.243, CLA.244
12 PLIP interactions:12 interactions with chain S- Hydrophobic interactions: S:K.59, S:R.62, S:I.63, S:L.66, S:I.79, S:Y.84, S:I.109, S:I.113, S:I.113, S:V.116
- Hydrogen bonds: S:Y.136, S:Y.136
UIX.268: 18 residues within 4Å:- Chain U: M.52, T.55, L.56, I.125, G.126, N.128, F.129, N.147, L.150, A.154, I.158, Q.161, F.170, P.171, Y.172
- Ligands: CLA.276, KC1.277, CLA.278
9 PLIP interactions:9 interactions with chain U- Hydrophobic interactions: U:M.52, U:L.56, U:F.129, U:L.150, U:A.154, U:I.158, U:F.170
- Hydrogen bonds: U:Q.161, U:P.171
UIX.304: 9 residues within 4Å:- Chain V: Y.97
- Chain W: R.31, L.77, A.150, G.154, L.155
- Ligands: KC1.294, CLA.307, KC1.308
1 PLIP interactions:1 interactions with chain W- Hydrophobic interactions: W:A.150
UIX.320: 6 residues within 4Å:- Chain X: F.151, F.152, G.155, L.156
- Ligands: CLA.323, KC1.324
4 PLIP interactions:4 interactions with chain X- Hydrophobic interactions: X:F.151, X:F.152, X:F.152, X:L.156
UIX.336: 9 residues within 4Å:- Chain X: F.119
- Chain Y: R.31, L.77, F.150, Y.151, G.154, L.155
- Ligands: PID.321, KC1.340
6 PLIP interactions:4 interactions with chain Y, 2 interactions with chain X- Hydrophobic interactions: Y:F.150, Y:Y.151, Y:L.155, X:F.119, X:F.119
- Hydrogen bonds: Y:R.31
UIX.352: 10 residues within 4Å:- Chain Z: F.19, R.31, L.77, F.152, F.153, G.156, L.157
- Ligands: CLA.162, CLA.355, KC1.356
5 PLIP interactions:5 interactions with chain Z- Hydrophobic interactions: Z:F.19, Z:F.152, Z:F.152, Z:F.153, Z:F.153
UIX.368: 13 residues within 4Å:- Chain 0: K.18, R.31, L.77, F.150, Y.151, G.154, L.155
- Chain Z: F.120, K.121
- Ligands: PID.351, PID.353, CLA.371, KC1.372
6 PLIP interactions:1 interactions with chain Z, 5 interactions with chain 0- Hydrophobic interactions: Z:F.120, 0:L.77, 0:L.77, 0:Y.151, 0:L.155
- Hydrogen bonds: 0:R.31
UIX.385: 11 residues within 4Å:- Chain 1: R.30, R.31, L.77, F.150, F.151, G.154, L.155
- Chain S: L.141
- Ligands: CLA.244, CLA.388, KC1.389
6 PLIP interactions:6 interactions with chain 1- Hydrophobic interactions: 1:F.150, 1:F.151, 1:F.151, 1:F.151
- Hydrogen bonds: 1:R.30, 1:R.31
UIX.399: 20 residues within 4Å:- Chain 2: M.38, C.41, L.42, L.101, G.102, L.105, N.124, L.127, A.128, G.131, L.135, Q.138
- Chain U: F.103, Y.123, F.124
- Ligands: CLA.403, CLA.406, KC1.407, CLA.408, CLA.410
12 PLIP interactions:4 interactions with chain U, 8 interactions with chain 2- Hydrophobic interactions: U:F.103, U:F.103, U:F.103, U:F.124, 2:M.38, 2:L.101, 2:L.105, 2:L.127, 2:L.127, 2:A.128, 2:L.135
- Hydrogen bonds: 2:Q.138
- 39 x KC1: Chlorophyll c1(Non-covalent)
KC1.114: 8 residues within 4Å:- Chain L: S.11, A.12, F.13, Y.18, K.153
- Ligands: DD6.113, CLA.115, DD6.249
6 PLIP interactions:6 interactions with chain L,- Hydrophobic interactions: L:Y.18, L:Y.18, L:Y.18
- Hydrogen bonds: L:A.12
- Salt bridges: L:K.153
- pi-Stacking: L:Y.18
KC1.122: 8 residues within 4Å:- Chain L: W.51, M.147, K.150, N.154, L.157
- Ligands: UIX.112, CLA.115, CLA.121
3 PLIP interactions:3 interactions with chain L,- Hydrophobic interactions: L:W.51, L:K.150
- Salt bridges: L:K.150
KC1.143: 16 residues within 4Å:- Chain M: G.106, S.107, Y.108, T.126, G.130, Q.133, I.134, L.137
- Chain T: M.80, V.85, W.88, V.91, A.92
- Ligands: DD6.134, DD6.252, CLA.261
9 PLIP interactions:4 interactions with chain M, 5 interactions with chain T,- Hydrophobic interactions: M:Q.133, M:I.134, M:L.137, T:M.80, T:V.85, T:W.88, T:V.91, T:A.92
- Hydrogen bonds: M:S.107
KC1.146: 10 residues within 4Å:- Chain 0: G.93, A.96, Y.97
- Chain M: I.95, Q.183, N.187, L.190
- Ligands: DD6.136, CLA.139, CLA.145
4 PLIP interactions:4 interactions with chain M,- Hydrophobic interactions: M:I.95, M:L.190
- Hydrogen bonds: M:Q.183
- Salt bridges: M:K.179
KC1.163: 7 residues within 4Å:- Chain N: M.141, K.144, N.148, L.151
- Ligands: DD6.153, CLA.156, CLA.162
4 PLIP interactions:4 interactions with chain N,- Hydrophobic interactions: N:L.151
- Hydrogen bonds: N:K.144
- Salt bridges: N:K.144, N:K.144
KC1.180: 9 residues within 4Å:- Chain O: V.59, M.141, K.144, N.148, L.151
- Ligands: DD6.170, CLA.173, CLA.179, CLA.327
4 PLIP interactions:4 interactions with chain O,- Hydrophobic interactions: O:V.59, O:L.151
- Salt bridges: O:K.144, O:K.144
KC1.195: 10 residues within 4Å:- Chain P: R.30, R.31, S.34, N.38, T.158
- Ligands: CLA.99, DD6.189, UIX.191, CLA.194, CLA.198
3 PLIP interactions:3 interactions with chain P,- Hydrogen bonds: P:R.30, P:S.34
- Salt bridges: P:R.30
KC1.200: 9 residues within 4Å:- Chain P: Y.119, Y.141, S.142, S.145, N.149, L.152
- Ligands: PID.190, CLA.193, CLA.199
3 PLIP interactions:3 interactions with chain P,- Hydrophobic interactions: P:L.152
- Hydrogen bonds: P:S.145, P:S.145
KC1.214: 6 residues within 4Å:- Chain Q: Q.142, N.146, L.149
- Ligands: UIX.206, CLA.207, CLA.213
2 PLIP interactions:2 interactions with chain Q,- Hydrophobic interactions: Q:L.149
- Hydrogen bonds: Q:Q.142
KC1.221: 8 residues within 4Å:- Chain R: G.11, G.12, F.13, Y.17, K.141
- Ligands: DD6.217, DD6.220, CLA.222
6 PLIP interactions:6 interactions with chain R,- Hydrophobic interactions: R:Y.17, R:Y.17, R:Y.17
- Hydrogen bonds: R:G.12
- Salt bridges: R:K.141
- pi-Stacking: R:Y.17
KC1.228: 9 residues within 4Å:- Chain R: F.134, Y.135, A.138, N.142, L.145
- Chain W: V.119
- Ligands: DD6.219, CLA.222, CLA.227
3 PLIP interactions:3 interactions with chain R,- Hydrophobic interactions: R:A.138, R:L.145
- Hydrogen bonds: R:F.134
KC1.237: 11 residues within 4Å:- Chain R: G.108, M.109
- Chain S: A.31, A.32, F.33, Y.36, K.158
- Ligands: CLA.226, DD6.232, DD6.236, CLA.238
7 PLIP interactions:6 interactions with chain S, 1 interactions with chain R,- Hydrophobic interactions: S:A.31, S:Y.36, S:Y.36, R:M.109
- Hydrogen bonds: S:A.32
- Salt bridges: S:K.158
- pi-Stacking: S:Y.36
KC1.245: 7 residues within 4Å:- Chain S: W.68, M.152, N.159, L.162
- Ligands: DD6.235, CLA.238, CLA.244
2 PLIP interactions:2 interactions with chain S,- Hydrophobic interactions: S:W.68, S:L.162
KC1.258: 8 residues within 4Å:- Chain M: P.166
- Chain T: R.30, R.31, S.34, H.38
- Ligands: DD6.252, CLA.257, CLA.261
4 PLIP interactions:4 interactions with chain T,- Hydrogen bonds: T:S.34, T:S.34
- Salt bridges: T:R.30, T:R.31
KC1.263: 10 residues within 4Å:- Chain T: R.130, K.131, S.134, N.138, L.141
- Ligands: PID.253, PID.254, PID.255, CLA.256, CLA.262
4 PLIP interactions:4 interactions with chain T,- Hydrophobic interactions: T:L.141
- Hydrogen bonds: T:S.134
- Salt bridges: T:R.130, T:K.131
KC1.277: 8 residues within 4Å:- Chain U: L.56, M.140, K.143, N.147, L.150
- Ligands: UIX.268, CLA.271, CLA.276
3 PLIP interactions:3 interactions with chain U,- Hydrophobic interactions: U:L.56, U:K.143, U:L.150
KC1.292: 11 residues within 4Å:- Chain P: M.123, V.126, G.127, R.129
- Chain V: R.30, R.31, H.38
- Ligands: CLA.202, DD6.286, CLA.291, CLA.295
7 PLIP interactions:2 interactions with chain P, 5 interactions with chain V,- Hydrophobic interactions: P:V.126
- Salt bridges: P:R.129, V:R.30, V:R.31
- pi-Stacking: V:H.38, V:H.38
- Metal complexes: V:H.38
KC1.294: 12 residues within 4Å:- Chain V: L.62, S.63, P.64, S.65, P.84, L.86, G.87, Q.90, I.91, Y.94
- Ligands: PID.285, UIX.304
5 PLIP interactions:5 interactions with chain V,- Hydrophobic interactions: V:P.64, V:I.91, V:Y.94
- Hydrogen bonds: V:S.65, V:S.65
KC1.297: 10 residues within 4Å:- Chain V: M.47, L.120, K.130, K.131, N.138, L.141
- Ligands: PID.288, PID.289, CLA.290, CLA.296
2 PLIP interactions:2 interactions with chain V,- Hydrophobic interactions: V:L.141
- Salt bridges: V:K.130
KC1.308: 9 residues within 4Å:- Chain V: Y.97
- Chain W: R.30, R.31, V.34, H.38
- Ligands: DD6.301, UIX.304, CLA.307, CLA.311
6 PLIP interactions:6 interactions with chain W,- Hydrophobic interactions: W:V.34
- Hydrogen bonds: W:R.30
- Salt bridges: W:R.30, W:R.31
- pi-Stacking: W:H.38
- Metal complexes: W:H.38
KC1.310: 10 residues within 4Å:- Chain W: L.62, S.63, S.65, P.84, L.86, G.87, Q.90, I.91, Y.94
- Ligands: PID.300
5 PLIP interactions:5 interactions with chain W,- Hydrophobic interactions: W:I.91, W:Y.94
- Hydrogen bonds: W:S.65, W:S.65, W:G.87
KC1.313: 10 residues within 4Å:- Chain W: M.47, K.130, K.131, S.134, N.138, L.141
- Ligands: PID.303, PID.305, CLA.306, CLA.312
3 PLIP interactions:3 interactions with chain W,- Hydrophobic interactions: W:L.141
- Salt bridges: W:K.130, W:K.131
KC1.324: 8 residues within 4Å:- Chain X: R.29, R.30, S.33, H.37
- Ligands: DD6.317, UIX.320, CLA.323, CLA.327
4 PLIP interactions:4 interactions with chain X,- Hydrogen bonds: X:S.33, X:S.33
- Salt bridges: X:R.29
- pi-Stacking: X:H.37
KC1.326: 12 residues within 4Å:- Chain O: P.71
- Chain X: L.61, S.62, P.63, S.64, P.83, V.85, G.86, Q.89, I.90, W.93
- Ligands: PID.316
4 PLIP interactions:4 interactions with chain X,- Hydrophobic interactions: X:I.90, X:W.93
- Hydrogen bonds: X:S.64, X:S.64
KC1.329: 10 residues within 4Å:- Chain X: M.46, M.49, K.132, S.135, N.139, L.142
- Ligands: PID.319, PID.321, CLA.322, CLA.328
4 PLIP interactions:4 interactions with chain X,- Hydrophobic interactions: X:L.142
- Hydrogen bonds: X:S.135, X:S.135
- Salt bridges: X:K.132
KC1.340: 11 residues within 4Å:- Chain X: A.118, K.120
- Chain Y: R.30, R.31, S.34, H.38, I.147
- Ligands: DD6.333, UIX.336, CLA.339, CLA.343
6 PLIP interactions:4 interactions with chain Y, 2 interactions with chain X,- Hydrophobic interactions: Y:I.147
- Salt bridges: Y:R.30, Y:R.31, X:K.120
- Metal complexes: Y:H.38
- Hydrogen bonds: X:K.120
KC1.342: 12 residues within 4Å:- Chain N: L.60, Y.63
- Chain Y: L.62, S.63, P.64, S.65, P.84, A.86, G.87, Q.90, I.91
- Ligands: PID.332
6 PLIP interactions:4 interactions with chain Y, 2 interactions with chain N,- Hydrophobic interactions: Y:P.64, Y:Q.90, Y:I.91, N:L.60, N:Y.63
- Hydrogen bonds: Y:S.65
KC1.345: 9 residues within 4Å:- Chain Y: M.47, R.130, K.131, S.134, N.138
- Ligands: PID.335, PID.337, CLA.338, CLA.344
5 PLIP interactions:5 interactions with chain Y,- Hydrogen bonds: Y:S.134, Y:S.134
- Salt bridges: Y:R.130, Y:R.130, Y:K.131
KC1.356: 11 residues within 4Å:- Chain N: R.129
- Chain Z: I.30, R.31, T.34, H.38, I.149
- Ligands: DD6.153, DD6.349, UIX.352, CLA.355, CLA.359
7 PLIP interactions:1 interactions with chain N, 6 interactions with chain Z,- Salt bridges: N:R.129, Z:R.31
- Hydrophobic interactions: Z:T.34, Z:I.149
- Hydrogen bonds: Z:T.34, Z:T.34
- Metal complexes: Z:H.38
KC1.358: 11 residues within 4Å:- Chain Z: L.62, S.63, P.64, S.65, P.84, Y.86, G.87, Q.90, I.91, W.94
- Ligands: PID.348
4 PLIP interactions:4 interactions with chain Z,- Hydrophobic interactions: Z:L.62, Z:W.94, Z:W.94
- Hydrogen bonds: Z:S.65
KC1.361: 9 residues within 4Å:- Chain Z: M.47, K.133, S.136, N.140, L.143
- Ligands: PID.351, PID.353, CLA.354, CLA.360
4 PLIP interactions:4 interactions with chain Z,- Hydrophobic interactions: Z:L.143
- Hydrogen bonds: Z:S.136, Z:S.136
- Salt bridges: Z:K.133
KC1.372: 11 residues within 4Å:- Chain 0: R.30, R.31, S.34, H.38, I.147
- Chain Z: K.121
- Ligands: PID.351, DD6.365, UIX.368, CLA.371, CLA.375
6 PLIP interactions:2 interactions with chain Z, 4 interactions with chain 0,- Hydrogen bonds: Z:K.121
- Salt bridges: Z:K.121, 0:R.30, 0:R.31
- Hydrophobic interactions: 0:I.147
- Metal complexes: 0:H.38
KC1.374: 12 residues within 4Å:- Chain 0: L.62, S.63, P.64, S.65, P.84, A.86, G.87, Q.90, I.91, Y.94
- Chain M: Y.103
- Ligands: PID.364
5 PLIP interactions:4 interactions with chain 0, 1 interactions with chain M,- Hydrophobic interactions: 0:I.91, 0:Y.94
- Hydrogen bonds: 0:S.65, 0:G.87, M:Y.103
KC1.377: 11 residues within 4Å:- Chain 0: M.47, R.130, K.131, S.134, N.138, L.141
- Ligands: PID.366, PID.367, PID.369, CLA.370, CLA.376
8 PLIP interactions:8 interactions with chain 0,- Hydrophobic interactions: 0:L.141
- Hydrogen bonds: 0:R.130, 0:R.130, 0:S.134, 0:S.134
- Salt bridges: 0:R.130, 0:R.130, 0:K.131
KC1.389: 10 residues within 4Å:- Chain 1: R.30, R.31, S.34, H.38
- Chain S: R.140
- Ligands: DD6.235, DD6.382, UIX.385, CLA.388, CLA.392
7 PLIP interactions:1 interactions with chain S, 6 interactions with chain 1,- Salt bridges: S:R.140, 1:R.30, 1:R.31
- Hydrogen bonds: 1:R.30, 1:S.34
- pi-Stacking: 1:H.38, 1:H.38
KC1.391: 11 residues within 4Å:- Chain 1: L.62, S.63, P.64, S.65, P.84, V.86, G.87, Q.90, I.91, Y.94
- Ligands: PID.381
3 PLIP interactions:3 interactions with chain 1,- Hydrophobic interactions: 1:I.91, 1:Y.94
- Hydrogen bonds: 1:S.65
KC1.394: 12 residues within 4Å:- Chain 1: M.47, I.50, R.130, K.131, S.134, N.138, L.141
- Ligands: PID.383, PID.384, PID.386, CLA.387, CLA.393
9 PLIP interactions:9 interactions with chain 1,- Hydrophobic interactions: 1:I.50, 1:L.141
- Hydrogen bonds: 1:R.130, 1:R.130, 1:S.134, 1:S.134
- Salt bridges: 1:R.130, 1:R.130, 1:K.131
KC1.402: 6 residues within 4Å:- Chain 2: Q.25, F.26, H.33
- Ligands: DD6.398, CLA.401, CLA.405
2 PLIP interactions:2 interactions with chain 2,- Hydrogen bonds: 2:Q.25
- Metal complexes: 2:H.33
KC1.407: 10 residues within 4Å:- Chain 2: R.116, V.120, N.124, L.127
- Chain K: Y.41
- Chain U: Y.106
- Ligands: BCR.109, UIX.399, CLA.400, CLA.406
6 PLIP interactions:2 interactions with chain K, 4 interactions with chain 2,- Hydrophobic interactions: K:Y.41, 2:V.120, 2:V.120, 2:L.127
- Hydrogen bonds: K:Y.41
- Salt bridges: 2:R.116
- 2 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.216: 14 residues within 4Å:- Chain J: Y.168
- Chain P: T.84, A.88, G.91, A.92
- Chain Q: L.87, Q.91, F.94, F.95
- Ligands: CLA.99, CLA.101, BCR.103, CLA.198, CLA.211
5 PLIP interactions:4 interactions with chain Q, 1 interactions with chain P- Hydrophobic interactions: Q:Q.91, Q:F.94, Q:F.95, P:A.88
- Hydrogen bonds: Q:Q.91
SQD.281: 11 residues within 4Å:- Chain B: Y.114
- Chain K: E.28, L.31, I.34
- Chain U: Q.91, L.94, S.95
- Ligands: CLA.273, CLA.275, CLA.279, DD6.283
3 PLIP interactions:2 interactions with chain K, 1 interactions with chain U- Hydrophobic interactions: K:I.34
- Hydrogen bonds: K:E.28, U:Q.91
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, X. et al., Structures and organizations of PSI-AcpPCI supercomplexes from red tidal and coral symbiotic photosynthetic dinoflagellates. Proc.Natl.Acad.Sci.USA (2024)
- Release Date
- 2024-02-28
- Peptides
- Photosystem I PsaA: A
Photosystem I PsaB: B
Photosystem I PsaC: C
Photosystem I PsaD: D
Photosystem I PsaE: E
Photosystem I PsaF: F
Photosystem I PsaR: G
Photosystem I PsaI: H
Photosystem I PsaJ: I
Photosystem I PsaL: J
Photosystem I PsaM: K
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-10, acpPCI-10: L
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-8, acpPCI-8: M
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-7, acpPCI-7: N
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-6, acpPCI-6: O
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-2, acpPCI-2: P
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-3, acpPCI-3: Q
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-4, acpPCI-4: R
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-5, acpPCI-5: S
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-9, acpPCI-9: T
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-11, acpPCI-11: U
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-12, acpPCI-12: V
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-13, acpPCI-13: W
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-15, acpPCI-15: X
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-16, acpPCI-16: Y0
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-17, acpPCI-17: Z
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-14, acpPCI-14: 1
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-1, acpPCI-1: 2 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
aB
bC
cD
dE
eF
fG
hH
iI
jJ
lK
mL
AM
GN
IO
KP
FQ
JR
MS
LT
DU
BV
HW
NX
OY
T0
CZ
Q1
P2
E - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-1-mer
- Ligands
- 223 x CLA: CHLOROPHYLL A(Non-covalent)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
- 1 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
- 12 x BCR: BETA-CAROTENE(Non-covalent)
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 11 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
- 8 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
- 49 x DD6: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol(Non-covalent)
- 49 x PID: PERIDININ(Non-covalent)
- 12 x UIX: [(1~{S},5~{R})-3,3,5-trimethyl-5-oxidanyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{S},4~{S},6~{R})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenylidene]cyclohexyl] ethanoate(Non-covalent)
- 39 x KC1: Chlorophyll c1(Non-covalent)
- 2 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, X. et al., Structures and organizations of PSI-AcpPCI supercomplexes from red tidal and coral symbiotic photosynthetic dinoflagellates. Proc.Natl.Acad.Sci.USA (2024)
- Release Date
- 2024-02-28
- Peptides
- Photosystem I PsaA: A
Photosystem I PsaB: B
Photosystem I PsaC: C
Photosystem I PsaD: D
Photosystem I PsaE: E
Photosystem I PsaF: F
Photosystem I PsaR: G
Photosystem I PsaI: H
Photosystem I PsaJ: I
Photosystem I PsaL: J
Photosystem I PsaM: K
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-10, acpPCI-10: L
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-8, acpPCI-8: M
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-7, acpPCI-7: N
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-6, acpPCI-6: O
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-2, acpPCI-2: P
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-3, acpPCI-3: Q
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-4, acpPCI-4: R
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-5, acpPCI-5: S
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-9, acpPCI-9: T
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-11, acpPCI-11: U
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-12, acpPCI-12: V
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-13, acpPCI-13: W
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-15, acpPCI-15: X
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-16, acpPCI-16: Y0
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-17, acpPCI-17: Z
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-14, acpPCI-14: 1
Chlorophyll a-chlorophyll c-peridinin-protein-complex I-1, acpPCI-1: 2 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
aB
bC
cD
dE
eF
fG
hH
iI
jJ
lK
mL
AM
GN
IO
KP
FQ
JR
MS
LT
DU
BV
HW
NX
OY
T0
CZ
Q1
P2
E - Membrane
-
We predict this structure to be a membrane protein.