SMTL ID : 8jxs.1

Structure of nanobody-bound DRD1_PF-6142 complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x V6X: 4-[3-methyl-4-(6-methylimidazo[1,2-a]pyrazin-5-yl)phenoxy]furo[3,2-c]pyridine

V6X.1: 14 residues within 4Å: Chain A: K.71, V.90, D.93, I.94, S.97, C.176, S.178, L.180, S.188, S.192, F.278, F.279, F.303, D.304 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.90, A:V.90, A:L.180, A:F.303 Hydrogen bonds: A:K.71 pi-Stacking: A:W.89, A:W.89, A:F.278

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fan, L. et al., Structural basis of psychedelic LSD recognition at dopamine D 1 receptor. Neuron (2024)

Release Date

2024-09-04

Peptides

D(1A) dopamine receptor: A
NBA3: B
Maltose/maltodextrin-binding periplasmic protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G: C
Fab 8D3 heavy chain: D
Fab 8D3 light chain: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
H

E
L

Membrane

We predict this structure to be a membrane protein.
Show / Hide

D(1A) dopamine receptor

NBA3

Maltose/maltodextrin-binding periplasmic protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G

Fab 8D3 heavy chain

Fab 8D3 light chain

Related Entries With Identical Sequence