SMTL ID : 8jy6.1

Structure of TbAQP2 in complex with anti-trypanosomatid drug melarsoprol

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x L1U: [(4~{R})-2-[4-[[4,6-bis(azanyl)-1,3,5-triazin-2-yl]amino]phenyl]-1,3,2-dithiarsolan-4-yl]methanol(Non-covalent)

L1U.1: 22 residues within 4Å: Chain A: L.84, A.88, K.89, I.110, V.114, L.118, G.127, H.128, L.129, N.130, V.133, M.196, L.218, V.222, I.241, V.245, V.249, L.258, A.259, M.260, N.261, L.264 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.245, A:L.264 Hydrogen bonds: A:L.258, A:A.259 L1U.2: 22 residues within 4Å: Chain B: L.84, A.88, K.89, I.110, V.114, L.118, G.127, H.128, L.129, N.130, V.133, M.196, L.218, V.222, I.241, V.245, V.249, L.258, A.259, M.260, N.261, L.264 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:V.245, B:L.264 Hydrogen bonds: B:L.258, B:A.259 L1U.3: 22 residues within 4Å: Chain C: L.84, A.88, K.89, I.110, V.114, L.118, G.127, H.128, L.129, N.130, V.133, M.196, L.218, V.222, I.241, V.245, V.249, L.258, A.259, M.260, N.261, L.264 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:V.245, C:L.264 Hydrogen bonds: C:L.258, C:A.259 L1U.4: 22 residues within 4Å: Chain D: L.84, A.88, K.89, I.110, V.114, L.118, G.127, H.128, L.129, N.130, V.133, M.196, L.218, V.222, I.241, V.245, V.249, L.258, A.259, M.260, N.261, L.264 4 PLIP interactions: 4 interactions with chain D Hydrophobic interactions: D:V.245, D:L.264 Hydrogen bonds: D:L.258, D:A.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, W. et al., Structural insights into drug transport by an aquaglyceroporin. Nat Commun (2024)

Release Date

2024-05-29

Peptides

Aquaglyceroporin 2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Aquaglyceroporin 2

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