- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-trimer
- Ligands
- 9 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 36 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.4: 2 residues within 4Å:- Chain A: F.55, N.57
Ligand excluded by PLIPNAG.5: 4 residues within 4Å:- Chain A: N.118, A.119, T.120, V.123
Ligand excluded by PLIPNAG.6: 3 residues within 4Å:- Chain A: N.159, N.160
- Chain C: I.463
Ligand excluded by PLIPNAG.7: 5 residues within 4Å:- Chain A: T.104, N.229, T.231
- Chain C: S.454, K.457
Ligand excluded by PLIPNAG.8: 3 residues within 4Å:- Chain A: N.275, E.276, N.277
Ligand excluded by PLIPNAG.9: 2 residues within 4Å:- Chain A: N.326, Q.575
Ligand excluded by PLIPNAG.10: 3 residues within 4Å:- Chain A: H.334, N.338, T.340
Ligand excluded by PLIPNAG.11: 1 residues within 4Å:- Chain A: N.652
Ligand excluded by PLIPNAG.12: 1 residues within 4Å:- Chain A: N.704
Ligand excluded by PLIPNAG.13: 4 residues within 4Å:- Chain A: A.701, E.1067, K.1068, N.1069
Ligand excluded by PLIPNAG.14: 1 residues within 4Å:- Chain A: N.1129
Ligand excluded by PLIPNAG.15: 3 residues within 4Å:- Chain A: N.611
- Chain B: I.829, K.830
Ligand excluded by PLIPNAG.19: 2 residues within 4Å:- Chain B: F.55, N.57
Ligand excluded by PLIPNAG.20: 4 residues within 4Å:- Chain B: N.118, A.119, T.120, V.123
Ligand excluded by PLIPNAG.21: 3 residues within 4Å:- Chain A: I.463
- Chain B: N.159, N.160
Ligand excluded by PLIPNAG.22: 5 residues within 4Å:- Chain A: S.454, K.457
- Chain B: T.104, N.229, T.231
Ligand excluded by PLIPNAG.23: 3 residues within 4Å:- Chain B: N.275, E.276, N.277
Ligand excluded by PLIPNAG.24: 2 residues within 4Å:- Chain B: N.326, Q.575
Ligand excluded by PLIPNAG.25: 3 residues within 4Å:- Chain B: H.334, N.338, T.340
Ligand excluded by PLIPNAG.26: 1 residues within 4Å:- Chain B: N.652
Ligand excluded by PLIPNAG.27: 1 residues within 4Å:- Chain B: N.704
Ligand excluded by PLIPNAG.28: 4 residues within 4Å:- Chain B: A.701, E.1067, K.1068, N.1069
Ligand excluded by PLIPNAG.29: 1 residues within 4Å:- Chain B: N.1129
Ligand excluded by PLIPNAG.30: 3 residues within 4Å:- Chain B: N.611
- Chain C: I.829, K.830
Ligand excluded by PLIPNAG.34: 2 residues within 4Å:- Chain C: F.55, N.57
Ligand excluded by PLIPNAG.35: 4 residues within 4Å:- Chain C: N.118, A.119, T.120, V.123
Ligand excluded by PLIPNAG.36: 3 residues within 4Å:- Chain B: I.463
- Chain C: N.159, N.160
Ligand excluded by PLIPNAG.37: 5 residues within 4Å:- Chain B: S.454, K.457
- Chain C: T.104, N.229, T.231
Ligand excluded by PLIPNAG.38: 3 residues within 4Å:- Chain C: N.275, E.276, N.277
Ligand excluded by PLIPNAG.39: 2 residues within 4Å:- Chain C: N.326, Q.575
Ligand excluded by PLIPNAG.40: 3 residues within 4Å:- Chain C: H.334, N.338, T.340
Ligand excluded by PLIPNAG.41: 1 residues within 4Å:- Chain C: N.652
Ligand excluded by PLIPNAG.42: 1 residues within 4Å:- Chain C: N.704
Ligand excluded by PLIPNAG.43: 4 residues within 4Å:- Chain C: A.701, E.1067, K.1068, N.1069
Ligand excluded by PLIPNAG.44: 1 residues within 4Å:- Chain C: N.1129
Ligand excluded by PLIPNAG.45: 3 residues within 4Å:- Chain A: I.829, K.830
- Chain C: N.611
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tamura, T. et al., Virological characteristics of the SARS-CoV-2 XBB.1.5 variant. To Be Published
- Release Date
- 2024-01-03
- Peptides
- Spike glycoprotein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-trimer
- Ligands
- 9 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 36 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tamura, T. et al., Virological characteristics of the SARS-CoV-2 XBB.1.5 variant. To Be Published
- Release Date
- 2024-01-03
- Peptides
- Spike glycoprotein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A