SMTL ID : 8k13.1

SID1 transmembrane family member 1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: N.64, Q.139 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.139 NAG.2: 6 residues within 4Å: Chain A: V.48, Y.78, N.80, E.121, K.157, L.159 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.80, A:E.121 NAG.3: 2 residues within 4Å: Chain A: D.70, N.133 No protein-ligand interaction detected (PLIP) NAG.4: 3 residues within 4Å: Chain B: N.64, Q.139, L.141 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.139 NAG.5: 6 residues within 4Å: Chain B: V.48, Y.78, N.80, E.121, K.157, L.159 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.80, B:E.121 NAG.6: 2 residues within 4Å: Chain B: D.70, N.133 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, L. et al., Cryo-EM structures of human SID-1 transmembrane family proteins and implications for their low-pH-dependent RNA transport activity. Cell Res. (2024)

Release Date

2024-07-10

Peptides

SID1 transmembrane family member 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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SID1 transmembrane family member 1