SMTL ID : 8k17.1

Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to collagen alpha-1(I) chain

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG.1: 2 residues within 4Å: Chain A: H.536, N.540 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.536 NAG.2: 2 residues within 4Å: Chain A: N.316, Q.319 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.316 NAG.4: 1 residues within 4Å: Chain B: N.87 No protein-ligand interaction detected (PLIP) NAG.5: 2 residues within 4Å: Chain B: F.362, N.363 No protein-ligand interaction detected (PLIP)

1 x FE: FE (III) ION

FE.3: 3 residues within 4Å: Chain A: H.587, D.589, H.659 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.587, A:D.589, A:H.659

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, W. et al., The structural basis for the collagen processing by human P3H1/CRTAP/PPIB ternary complex. Nat Commun (2024)

Release Date

2024-09-18

Peptides

Prolyl 3-hydroxylase 1: A
Cartilage-associated protein: B
Peptidyl-prolyl cis-trans isomerase B: C
synthetic substrate: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
E

Prolyl 3-hydroxylase 1

Cartilage-associated protein

Peptidyl-prolyl cis-trans isomerase B

synthetic substrate

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