SMTL ID : 8k1m.1

mycobacterial efflux pump, apo state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-2-mer

Ligands

1 x L9Q: (1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate(Non-covalent)

L9Q.1: 6 residues within 4Å: Chain A: L.314, W.315, G.318, R.382, Q.385 Ligands: CDL.2 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.315, A:W.315 Salt bridges: A:R.382

1 x CDL: CARDIOLIPIN(Non-covalent)

CDL.2: 13 residues within 4Å: Chain A: S.40, L.47, L.48, M.105, L.109, A.113, L.116, R.120, R.206, R.209, F.213, F.220 Ligands: L9Q.1 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.47, A:L.48, A:A.113, A:F.213, A:F.213, A:F.220 Salt bridges: A:R.120, A:R.120, A:R.206, A:R.209, A:R.209

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Y. et al., mycobacterial efflux pump, apo state. To Be Published

Release Date

2024-07-17

Peptides

Multidrug efflux system permease protein Rv1217c: A
Multidrug efflux system ATP-binding protein Rv1218c: BC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

Membrane

We predict this structure to be a membrane protein.
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Multidrug efflux system permease protein Rv1217c

Multidrug efflux system ATP-binding protein Rv1218c

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