- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-10-mer
- Ligands
- 21 x SO4: SULFATE ION(Non-functional Binders)
- 5 x CO3: CARBONATE ION(Non-functional Binders)
CO3.5: 9 residues within 4Å:- Chain A: I.124, S.126, A.127, I.128, L.155
- Chain D: R.100
- Chain I: R.100
- Chain J: I.124
- Ligands: VQO.31
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain I- Hydrogen bonds: A:A.127, A:I.128, I:R.100
CO3.8: 8 residues within 4Å:- Chain A: R.100
- Chain B: I.124, S.126, A.127, I.128
- Chain D: I.124
- Chain F: R.100
- Ligands: VQO.14
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:R.100
CO3.11: 8 residues within 4Å:- Chain C: R.100
- Chain E: R.100
- Chain G: I.124
- Chain H: I.124, S.126, A.127, I.128
- Ligands: VQO.19
3 PLIP interactions:1 interactions with chain E, 2 interactions with chain C- Hydrogen bonds: E:R.100, C:R.100, C:R.100
CO3.22: 8 residues within 4Å:- Chain B: R.100
- Chain E: I.124
- Chain F: I.124, S.126, A.127, I.128
- Chain G: R.100
- Ligands: VQO.18
4 PLIP interactions:3 interactions with chain F, 1 interactions with chain G- Hydrogen bonds: F:A.127, F:I.128, G:R.100
- Water bridges: F:N.129
CO3.26: 9 residues within 4Å:- Chain C: I.124, L.155
- Chain H: R.100
- Chain I: I.124, S.126, A.127, I.128
- Chain J: R.100
- Ligands: VQO.12
4 PLIP interactions:1 interactions with chain H, 3 interactions with chain I- Hydrogen bonds: H:R.100, I:A.127, I:I.128
- Water bridges: I:N.129
- 5 x VQO: methanimidate(Non-covalent)
VQO.12: 9 residues within 4Å:- Chain C: I.124, S.126, A.127, I.128, L.155
- Chain H: R.100
- Chain I: I.124
- Chain J: R.100
- Ligands: CO3.26
4 PLIP interactions:3 interactions with chain C, 1 interactions with chain J- Hydrogen bonds: C:S.126, C:A.127, C:I.128, J:R.100
VQO.14: 8 residues within 4Å:- Chain A: R.100
- Chain B: I.124
- Chain D: I.124, S.126, A.127, I.128
- Chain F: R.100
- Ligands: CO3.8
5 PLIP interactions:4 interactions with chain D, 1 interactions with chain F- Hydrogen bonds: D:S.126, D:S.126, D:A.127, D:I.128, F:R.100
VQO.18: 8 residues within 4Å:- Chain B: R.100
- Chain E: I.124, S.126, A.127, I.128
- Chain F: I.124
- Chain G: R.100
- Ligands: CO3.22
5 PLIP interactions:1 interactions with chain B, 4 interactions with chain E- Hydrogen bonds: B:R.100, E:S.126, E:S.126, E:A.127, E:I.128
VQO.19: 8 residues within 4Å:- Chain C: R.100
- Chain E: R.100
- Chain G: I.124, S.126, A.127, I.128
- Chain H: I.124
- Ligands: CO3.11
6 PLIP interactions:4 interactions with chain G, 2 interactions with chain C- Hydrogen bonds: G:S.126, G:A.127, G:I.128, C:R.100, C:R.100
- Water bridges: G:N.129
VQO.31: 10 residues within 4Å:- Chain A: I.124, L.155
- Chain D: R.100
- Chain I: R.100
- Chain J: I.124, S.126, A.127, I.128, L.155
- Ligands: CO3.5
5 PLIP interactions:4 interactions with chain J, 1 interactions with chain D- Hydrogen bonds: J:S.126, J:S.126, J:A.127, J:I.128, D:R.100
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, J. et al., Structural mechanism of Escherichia coli cyanase. Acta Crystallogr D Struct Biol (2023)
- Release Date
- 2023-12-13
- Peptides
- Cyanate hydratase: ABCDEFGHIJ
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
J
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-10-mer
- Ligands
- 21 x SO4: SULFATE ION(Non-functional Binders)
- 5 x CO3: CARBONATE ION(Non-functional Binders)
- 5 x VQO: methanimidate(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, J. et al., Structural mechanism of Escherichia coli cyanase. Acta Crystallogr D Struct Biol (2023)
- Release Date
- 2023-12-13
- Peptides
- Cyanate hydratase: ABCDEFGHIJ
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
J