SMTL ID : 8k8c.1

Crystal structure of C/EBPalpha BZIP domain bound to a high affinity DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.06 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: D.41, R.44, L.45, R.48 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.41, A:R.44, A:R.48 Water bridges: A:R.44, A:R.48 GOL.2: 2 residues within 4Å: Chain A: R.7, N.14 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.7, A:R.7, A:N.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, S. et al., Structural basis for specific DNA sequence recognition by the transcription factor NFIL3. J.Biol.Chem. (2024)

Release Date

2024-03-06

Peptides

CCAAT/enhancer-binding protein alpha: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CCAAT/enhancer-binding protein alpha