SMTL ID : 8k9b.1

SARS-CoV-2 spike protein in complex with one S2H5 Fab

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: N.122, T.124, V.127, E.154 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.154

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hong, Q. et al., Molecular basis of SARS-CoV-2 immune evasion of NTD neutralizing antibodies. Dian Zi Xian Wei Xue Bao (2024)

Release Date

2024-07-31

Peptides

Spike glycoprotein: ADE
Heavy chain of S2H5 Fab: B
Light chain of S2H5 Fab: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

D
C

E
D

B
A

C
B

Spike glycoprotein

Heavy chain of S2H5 Fab

Light chain of S2H5 Fab

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