SMTL ID : 8kbf.1

Structure of CbTad1 complexed with 1',3'-cADPR and cA3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

homo-dimer

Ligands

2 x A- A- A: (2-ACETYL-5-METHYLANILINO)(2,6-DIBROMOPHENYL)ACETAMIDE(Non-covalent)

A-A-A.1: 6 residues within 4Å: Chain A: Q.97, S.103, R.104, A.107, C.108, T.111 Protein-ligand interaction information (PLIP) not available A-A-A.2: 6 residues within 4Å: Chain B: Q.97, S.103, R.104, A.107, C.108, T.111 Protein-ligand interaction information (PLIP) not available

2 x OJC: (2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione(Non-covalent)

OJC.3: 19 residues within 4Å: Chain A: P.38, G.39, H.43, Q.67, G.69, A.70, R.71, R.123, R.127, L.133, G.134, T.135, N.136 Chain B: L.27, R.92, L.93, F.96, F.101, N.106 19 PLIP interactions: 14 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:P.38, A:H.43, A:G.69, A:R.71, A:R.123, A:R.123, A:V.132, A:G.134, A:T.135, B:R.92, B:N.106, B:N.106 Salt bridges: A:R.71, A:R.123, A:R.127 pi-Cation interactions: A:R.123, A:R.123 pi-Stacking: B:F.96, B:F.96 OJC.4: 20 residues within 4Å: Chain A: L.27, R.92, L.93, F.96, F.101, N.106 Chain B: P.38, G.39, H.43, Q.67, K.68, G.69, A.70, R.71, I.81, R.123, R.127, L.133, G.134, T.135 21 PLIP interactions: 15 interactions with chain B, 6 interactions with chain A Hydrogen bonds: B:P.38, B:H.43, B:G.69, B:R.71, B:R.123, B:V.132, B:G.134, B:T.135, A:R.92, A:R.92, A:N.106, A:N.106 Water bridges: B:A.70, B:R.71 Salt bridges: B:R.71, B:R.123, B:R.127 pi-Cation interactions: B:R.123, B:R.123 pi-Stacking: A:F.96, A:F.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, D. et al., Single phage proteins sequester signals from TIR and cGAS-like enzymes. Nature (2024)

Release Date

2024-08-07

Peptides

Thoeris anti-defense 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Thoeris anti-defense 1

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