SMTL ID : 8kci.1

ATP-bound hMRP5 outward-open

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Covalent)

ATP.1: 15 residues within 4Å: Chain A: W.499, S.596, V.597, G.600, K.601, T.602, Q.630, D.1328, N.1329, F.1330, S.1331, V.1332, G.1333, E.1334, R.1335 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.596, A:T.602, A:S.603, A:Q.630, A:D.1328, A:S.1331, A:E.1334, A:R.1335 ATP.2: 14 residues within 4Å: Chain A: A.683, N.684, S.686, G.688, Q.689, Y.1202, V.1209, T.1229, G.1230, S.1231, G.1232, K.1233, S.1234 Ligands: MG.4 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:S.686, A:G.687, A:G.688, A:Q.689, A:T.1229, A:G.1230, A:K.1233, A:K.1233, A:S.1234 Salt bridges: A:K.1233 pi-Stacking: A:Y.1202, A:Y.1202

2 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: T.602, Q.630, D.709 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.602 MG.4: 4 residues within 4Å: Chain A: K.1233, S.1234, Q.1275 Ligands: ATP.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, Y. et al., Inhibition and transport mechanisms of the ABC transporter hMRP5. Nat Commun (2024)

Release Date

2024-07-03

Peptides

ATP-binding cassette sub-family C member 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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ATP-binding cassette sub-family C member 5