SMTL ID : 8og2.1

Crystal structure of CREBBP histone acetyltransferase domain in complex with Coenzyme A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.47 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.116 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.116

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.146, C.147, H.238, C.241 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.146, A:C.147, A:H.238, A:C.241 ZN.3: 4 residues within 4Å: Chain A: C.230, C.233, C.255, C.258 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.230, A:C.233, A:C.255, A:C.258 ZN.4: 4 residues within 4Å: Chain A: C.597, C.600, C.619, N.621 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.597, A:C.600, A:C.619 ZN.5: 5 residues within 4Å: Chain A: C.610, C.613, Y.616, H.628, H.630 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.628, A:H.630

1 x COA: COENZYME A(Covalent)

COA.6: 19 residues within 4Å: Chain A: L.381, D.382, S.383, R.393, T.394, Y.397, W.419, C.421, P.423, Y.429, Q.438, K.439, I.440, P.441, K.442, R.445, L.446, W.449, F.450 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.381, A:Y.397, A:P.423, A:Y.429, A:L.446, A:W.449 Hydrogen bonds: A:K.439, A:K.439, A:I.440, A:K.442, A:K.442, A:R.445 Water bridges: A:R.390 Salt bridges: A:R.393, A:K.439 pi-Cation interactions: A:K.442

1 x NA: SODIUM ION(Non-functional Binders)

NA.7: 4 residues within 4Å: Chain A: W.112, L.113, N.115, R.116 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mechaly, A.E. et al., Crystal structure of CREBBP histone acetyltransferase domain in complex with Coenzyme A. To Be Published

Release Date

2024-04-03

Peptides

histone acetyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

histone acetyltransferase