SMTL ID : 8oio.2 (3 other biounits)

Crystal structure of the kelch domain of human KLHL12 in complex with PLEKHA4 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: T.238, S.239 Ligand excluded by PLIP

3 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: S.280, W.281 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.280 NA.3: 1 residues within 4Å: Chain A: S.95 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.95 NA.4: 3 residues within 4Å: Chain A: D.263, N.265, S.266 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.263

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 7 residues within 4Å: Chain A: N.14, E.15, D.37, P.38, K.39, L.252, R.253 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.37, A:K.39 EDO.6: 4 residues within 4Å: Chain A: S.60, T.250, C.297, V.298 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.60, A:V.298 Water bridges: A:S.60, A:A.249 EDO.7: 1 residues within 4Å: Chain A: K.39 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalietou, E.V. et al., Crystal structure of the kelch domain of human KLHL12 in complex with PLEKHA4 peptide. To Be Published

Release Date

2024-04-03

Peptides

Kelch-like protein 12: A
Pleckstrin homology domain-containing family A member 4: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
F

Kelch-like protein 12

Pleckstrin homology domain-containing family A member 4

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