SMTL ID : 8oj2.1

Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with protomor-like sequence IR7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.56 Å

Oligo State

homo-dimer

Ligands

2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.1: 8 residues within 4Å: Chain A: R.71, Y.72, N.73, L.74, H.247, L.251, R.326, W.327 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:P.70, A:Y.72, A:L.74 Salt bridges: A:R.71 MES.3: 8 residues within 4Å: Chain C: R.71, Y.72, N.73, L.74, H.247, L.251, R.326, W.327 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:P.70, C:Y.72, C:L.74 Salt bridges: C:R.71

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: D.25, L.87 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain C: D.25, L.87 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crespo, I. et al., Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with protomor-like sequence IR7. To Be Published

Release Date

2024-04-17

Peptides

Auxin response factor: AC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

Auxin response factor

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