SMTL ID : 8oku.1

Salt-Inducible Kinase 3 in complex with an inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-dimer

Ligands

2 x VRU: ~{N}-ethyl-4-[5-[1-(2-hydroxyethyl)pyrazol-4-yl]benzimidazol-1-yl]-2,6-dimethoxy-benzamide

VRU.1: 17 residues within 4Å: Chain A: I.26, K.28, G.29, V.34, R.36, A.47, K.49, T.96, E.97, Y.98, A.99, S.100, G.102, N.147, L.149, D.160 Chain B: R.90 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.26, A:I.26, A:V.34, A:V.34, A:A.47, A:Y.98, A:L.149 Hydrogen bonds: A:R.36, A:K.49, A:T.96, A:A.99, A:N.147, A:D.160, A:D.160 VRU.2: 17 residues within 4Å: Chain B: I.26, G.29, V.34, A.47, K.49, T.96, E.97, Y.98, A.99, S.100, G.101, G.102, E.146, N.147, L.149, A.159, D.160 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:I.26, B:I.26, B:V.34, B:V.34, B:K.49, B:Y.98, B:L.149 Hydrogen bonds: B:R.24, B:K.49, B:A.99, B:D.160

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Temal-Laib, T. et al., Optimization of Selectivity and Pharmacokinetic Properties of Salt-Inducible Kinase Inhibitors that Led to the Discovery of Pan-SIK Inhibitor GLPG3312. J.Med.Chem. (2024)

Release Date

2024-01-10

Peptides

Serine/threonine-protein kinase SIK3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase SIK3