SMTL ID : 8oo8.1

Three-Dimensional Structure of Human Carbonic Anhydrase II in Complex with a Covalent Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.93, H.95, E.105, H.118, T.197 Ligands: VV8.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.93, A:H.95, A:H.118

1 x VV8: 3-(cyclooctylamino)-4-ethylsulfonyl-2,5,6-tris(fluoranyl)benzenesulfonamide(Covalent)

VV8.2: 19 residues within 4Å: Chain A: N.61, H.63, A.64, N.66, I.90, Q.91, H.93, H.95, E.105, H.118, V.120, F.129, V.133, V.141, L.196, T.197, T.198, W.207 Ligands: ZN.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.90, A:V.120, A:F.129, A:V.133 Hydrogen bonds: A:T.197 pi-Cation interactions: A:H.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vaskevicius, A. et al., Targeted anticancer pre-vinylsulfone covalent inhibitors of carbonic anhydrase IX. Elife (2024)

Release Date

2024-04-10

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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