SMTL ID : 8oo9.1

CryoEM Structure INO80core Hexasome complex ATPase-DNA refinement state1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 17 residues within 4Å: Chain A: C.253, Q.254, L.255, K.256, Q.259, G.283, G.285, K.286, T.287, V.288, E.322, F.326, N.919, R.947, L.948 Ligands: MG.2, ALF.3 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:Q.254, A:K.256, A:Q.259, A:G.283, A:L.284, A:G.285, A:K.286, A:T.287, A:T.287, A:T.287 Salt bridges: A:K.286, A:R.947, A:R.947 pi-Stacking: A:F.326

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: T.287, E.391 Ligands: ADP.1, ALF.3 No protein-ligand interaction detected (PLIP)

1 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)

ALF.3: 10 residues within 4Å: Chain A: M.282, G.283, K.286, E.391, G.917, Q.940, R.944, R.947 Ligands: ADP.1, MG.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, M. et al., Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling. Science (2023)

Release Date

2023-07-26

Peptides

Chromatin-remodeling ATPase INO80: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

Chromatin-remodeling ATPase INO80

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