SMTL ID : 8ors.1

Knockout of GMC-oxidoreductase genes reveals that functional redundancy preserves mimivirus essential functions

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 28 residues within 4Å: Chain A: G.63, A.64, G.65, A.66, E.87, A.88, W.125, A.143, H.144, G.145, M.146, G.147, G.150, S.151, T.152, N.155, R.156, N.158, A.311, V.313, S.348, I.356, S.627, H.628, L.656, N.666, T.667, W.668 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:N.155 Hydrogen bonds: A:A.64, A:A.64, A:A.66, A:A.88, A:G.145, A:G.147, A:S.151, A:N.155, A:R.156, A:N.158, A:N.158, A:V.313, A:V.313, A:L.656, A:T.667, A:W.668 Salt bridges: A:H.144 pi-Stacking: A:H.628, A:H.628 FAD.2: 30 residues within 4Å: Chain B: G.63, G.65, A.66, E.87, A.88, W.125, A.143, H.144, G.145, M.146, G.147, G.150, S.151, T.152, N.155, R.156, N.158, A.311, V.312, V.313, T.347, S.348, G.349, Y.352, S.627, H.628, N.666, T.667, W.668, A.671 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:N.155 Hydrogen bonds: B:A.66, B:A.88, B:G.145, B:G.147, B:S.151, B:T.152, B:N.155, B:R.156, B:N.158, B:N.158, B:V.313, B:V.313, B:T.667, B:T.667, B:W.668 Salt bridges: B:H.144 pi-Stacking: B:H.628, B:H.628

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alempic, J.M. et al., Functional redundancy revealed by the deletion of the mimivirus GMC-oxidoreductase genes. Microlife (2024)

Release Date

2024-04-17

Peptides

Putative GMC-type oxidoreductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative GMC-type oxidoreductase

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