SMTL ID : 8orx.1

Structure of the murine LYVE-1 (lymphatic vessel endothelial receptor-1) hyaluronan binding domain in an unliganded state

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

monomer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: N.52, E.55, S.119, S.120 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.52 Water bridges: A:T.54 NAG.2: 6 residues within 4Å: Chain A: R.36, L.63, L.65, N.129, S.131, D.132 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.65 Hydrogen bonds: A:R.36, A:N.129 Water bridges: A:R.36, A:D.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bano, F. et al., Structure of the murine LYVE-1 (lymphatic vessel endothelial receptor-1) hyaluronan binding domain in an unliganded state. To be published

Release Date

2024-10-16

Peptides

Lymphatic vessel endothelial hyaluronic acid receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lymphatic vessel endothelial hyaluronic acid receptor 1