SMTL ID : 8otl.1 (1 other biounit)

structure of InhA from Mycobacterium tuberculosis in complex with 5-(((4-(2-hydroxyphenoxy)benzyl)(octyl)amino)methyl)-2-phenoxyphenol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 24 residues within 4Å: Chain A: G.17, I.18, I.19, S.23, I.24, F.44, L.66, D.67, V.68, S.97, I.98, G.99, I.125, M.150, D.151, F.152, Y.161, M.164, K.168, A.194, G.195, P.196, I.197, T.199 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:I.24, A:F.152, A:F.152, A:A.194 Hydrogen bonds: A:G.17, A:S.23, A:I.24, A:D.67, A:D.67, A:V.68, A:I.98, A:G.99, A:Y.161, A:K.168, A:I.197, A:T.199 Water bridges: A:A.25, A:F.44, A:I.98, A:G.99 NAD.2: 23 residues within 4Å: Chain B: G.17, I.18, I.19, S.23, I.24, F.44, L.66, D.67, V.68, S.97, I.98, G.99, I.125, M.150, D.151, F.152, K.168, A.194, G.195, P.196, I.197, T.199, M.202 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:I.24, B:F.152, B:A.194 Hydrogen bonds: B:G.17, B:I.24, B:D.67, B:V.68, B:I.98, B:G.99, B:K.168, B:I.197, B:I.197 Water bridges: B:A.25, B:I.98 NAD.3: 24 residues within 4Å: Chain C: G.17, I.18, I.19, S.23, I.24, F.44, L.66, D.67, V.68, S.97, I.98, G.99, I.125, M.150, D.151, F.152, Y.161, M.164, K.168, A.194, G.195, P.196, I.197, T.199 19 PLIP interactions: 19 interactions with chain C Hydrophobic interactions: C:I.24, C:F.152, C:F.152, C:A.194 Hydrogen bonds: C:G.17, C:S.23, C:I.24, C:D.67, C:V.68, C:I.98, C:G.99, C:K.168, C:I.197, C:T.199, C:T.199 Water bridges: C:A.25, C:F.44, C:I.98, C:G.99 NAD.4: 23 residues within 4Å: Chain D: G.17, I.18, I.19, S.23, I.24, F.44, L.66, D.67, V.68, S.97, I.98, G.99, I.125, M.150, D.151, F.152, K.168, A.194, G.195, P.196, I.197, T.199, M.202 14 PLIP interactions: 14 interactions with chain D Hydrophobic interactions: D:I.24, D:F.152, D:A.194 Hydrogen bonds: D:G.17, D:I.24, D:D.67, D:V.68, D:I.98, D:G.99, D:K.168, D:I.197, D:I.197 Water bridges: D:A.25, D:I.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tamhaev, R. et al., Exploring the plasticity of the InhA substrate-binding site using new diaryl ether inhibitors. Bioorg.Chem. (2023)

Release Date

2024-01-24

Peptides

Enoyl-[acyl-carrier-protein] reductase [NADH]: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Enoyl-[acyl-carrier-protein] reductase [NADH]

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