SMTL ID : 8ov5.1

PERIDININ-CHLOROPHYLL-PROTEIN OF AMPHIDINIUM CARTERAE, 100K

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.15 Å

Oligo State

homo-trimer

Ligands

6 x CLA: CHLOROPHYLL A(Non-covalent)

CLA.1: 29 residues within 4Å: Chain A: L.10, S.14, F.17, W.23, M.50, L.59, A.62, A.63, H.66, I.70, W.85, N.89, L.92, V.95, I.96, Y.108, A.132, A.135, Y.136, F.139, L.204, I.207, I.211 Ligands: PID.3, PID.4, PID.5, PID.6, W4I.7, PID.10 10 PLIP interactions: 9 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:F.17, A:W.23, A:A.62, A:H.66, A:I.70, A:W.85, A:F.139, A:L.204 pi-Stacking: A:H.66 Metal complexes: H2O.1 CLA.2: 30 residues within 4Å: Chain A: L.41, I.44, I.48, L.173, S.177, F.180, L.181, I.184, W.186, L.222, A.225, A.226, H.229, I.233, Y.247, N.251, L.254, I.258, Y.270, A.294, A.297, A.298, F.301, Y.302 Ligands: PID.5, PID.8, PID.9, PID.10, PID.11, W4I.12 15 PLIP interactions: 14 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:L.41, A:F.180, A:F.180, A:L.181, A:I.184, A:W.186, A:A.225, A:I.233, A:L.254, A:Y.270, A:A.298, A:F.301, A:F.301 pi-Stacking: A:H.229 Metal complexes: H2O.1 CLA.14: 29 residues within 4Å: Chain B: L.10, S.14, F.17, V.21, W.23, M.50, L.59, A.62, A.63, H.66, I.70, W.85, N.89, L.92, I.96, Y.108, A.132, A.135, Y.136, F.139, L.204, I.207, I.211 Ligands: PID.16, PID.17, PID.18, PID.19, W4I.20, PID.23 9 PLIP interactions: 8 interactions with chain B, 1 Ligand-Water interactions Hydrophobic interactions: B:F.17, B:W.23, B:A.62, B:H.66, B:W.85, B:F.139, B:L.204 pi-Stacking: B:H.66 Metal complexes: H2O.24 CLA.15: 30 residues within 4Å: Chain B: L.41, I.44, I.48, L.173, S.177, F.180, L.181, I.184, W.186, L.222, A.225, A.226, H.229, I.233, Y.247, N.251, L.254, I.258, Y.270, A.294, A.297, A.298, F.301, Y.302 Ligands: PID.18, PID.21, PID.22, PID.23, PID.24, W4I.25 14 PLIP interactions: 13 interactions with chain B, 1 Ligand-Water interactions Hydrophobic interactions: B:L.41, B:F.180, B:F.180, B:L.181, B:I.184, B:W.186, B:A.225, B:I.233, B:Y.270, B:A.298, B:F.301, B:F.301 pi-Stacking: B:H.229 Metal complexes: H2O.24 CLA.27: 29 residues within 4Å: Chain C: L.10, S.14, F.17, V.21, W.23, M.50, L.59, A.62, A.63, H.66, I.70, W.85, N.89, L.92, I.96, Y.108, A.132, A.135, Y.136, F.139, L.204, I.207, I.211 Ligands: PID.29, PID.30, PID.31, PID.32, W4I.33, PID.36 11 PLIP interactions: 10 interactions with chain C, 1 Ligand-Water interactions Hydrophobic interactions: C:F.17, C:W.23, C:A.62, C:H.66, C:I.70, C:W.85, C:A.135, C:F.139, C:L.204 pi-Stacking: C:H.66 Metal complexes: H2O.46 CLA.28: 30 residues within 4Å: Chain C: L.41, I.44, I.48, L.173, S.177, F.180, L.181, I.184, W.186, L.222, A.225, A.226, H.229, I.233, Y.247, N.251, L.254, I.258, Y.270, A.294, A.297, A.298, F.301, Y.302 Ligands: PID.31, PID.34, PID.35, PID.36, PID.37, W4I.38 13 PLIP interactions: 12 interactions with chain C, 1 Ligand-Water interactions Hydrophobic interactions: C:L.41, C:F.180, C:F.180, C:L.181, C:I.184, C:W.186, C:A.225, C:L.254, C:A.298, C:F.301, C:F.301 pi-Stacking: C:H.229 Metal complexes: H2O.46

24 x PID: PERIDININ(Non-covalent)

PID.3: 25 residues within 4Å: Chain A: F.17, V.21, W.23, N.25, G.26, F.28, L.29, P.120, A.121, M.123, K.124, V.127, A.132, E.133, Y.136, L.195, A.200, S.203, L.204, I.207 Ligands: CLA.1, PID.4, PID.6, W4I.7, W4I.12 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.17, A:V.21, A:W.23, A:F.28, A:F.28, A:F.28, A:F.28, A:F.28, A:K.124, A:K.124, A:Y.136 Hydrogen bonds: A:K.124, A:S.203 Water bridges: A:N.25 PID.4: 24 residues within 4Å: Chain A: I.27, F.28, Q.30, A.31, P.32, G.33, D.116, K.118, V.119, Y.122, M.123, I.207, M.210, I.211 Chain B: L.292, D.293, A.296 Ligands: CLA.1, PID.3, PID.5, W4I.7, PID.9, PID.10, W4I.12 9 PLIP interactions: 8 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:I.27, A:I.27, A:F.28, A:K.118, A:V.119, A:Y.122, A:Y.122, A:Y.122, B:A.296 PID.5: 24 residues within 4Å: Chain A: M.47, I.48, M.50, G.51, A.52, L.59, V.104, M.105, V.107, Y.108, Y.136, F.139, L.140, K.143, L.222, K.223, A.226 Ligands: CLA.1, CLA.2, PID.4, PID.6, W4I.7, PID.9, PID.10 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:M.47, A:V.107, A:Y.108, A:L.140, A:A.226 pi-Stacking: A:Y.108 PID.6: 30 residues within 4Å: Chain A: W.23, N.24, H.66, A.69, I.70, V.73, G.78, V.79, T.80, W.85, V.88, N.89, L.92, G.93, I.96, E.101, V.104, M.105, F.139, F.142, K.143, V.146, K.147, Q.150, A.200, Q.201, L.204 Ligands: CLA.1, PID.3, PID.5 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:W.23, A:W.23, A:I.70, A:V.73, A:W.85, A:V.88, A:L.92, A:I.96, A:I.96, A:F.142, A:K.143, A:K.143, A:K.147, A:K.147 Hydrogen bonds: A:G.78, A:T.80, A:E.101, A:E.101, A:K.147, A:Q.201 pi-Stacking: A:F.139 PID.8: 30 residues within 4Å: Chain A: A.31, P.32, L.35, P.37, A.40, L.41, I.44, I.114, F.180, I.184, W.186, S.188, Y.191, M.192, P.282, L.283, M.285, F.286, V.289, A.294, N.295, A.298, Y.302 Chain C: G.26, P.194 Ligands: CLA.2, W4I.7, PID.9, PID.11, W4I.12 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.35, A:I.114, A:I.184, A:W.186, A:Y.191, A:Y.191, A:Y.191, A:P.282, A:M.285, A:F.286 Water bridges: A:S.188, A:N.295 PID.9: 25 residues within 4Å: Chain A: I.44, M.47, I.48, V.190, Y.191, K.193, P.194, P.196, S.280, I.281, N.284, M.285 Chain B: S.280, L.283, N.284, S.287 Ligands: CLA.2, PID.4, PID.5, W4I.7, PID.8, PID.10, W4I.12, PID.22, PID.35 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:Y.191, A:P.196, A:I.281 Hydrogen bonds: A:N.284 Water bridges: B:N.284 PID.10: 25 residues within 4Å: Chain A: L.59, K.60, A.63, M.210, I.211, M.213, G.214, A.215, L.222, V.257, I.258, V.266, M.267, V.269, Y.270, F.301, Y.302, K.305 Ligands: CLA.1, CLA.2, PID.4, PID.5, PID.9, PID.11, W4I.12 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.59, A:M.210, A:M.213, A:L.222, A:V.269, A:Y.270, A:Y.302 Water bridges: A:Y.270 pi-Stacking: A:Y.270 PID.11: 32 residues within 4Å: Chain A: P.37, L.38, L.41, L.173, L.181, W.186, L.187, H.229, A.232, I.233, I.236, G.240, V.241, T.242, Y.247, V.250, N.251, L.254, G.255, I.258, K.263, V.266, M.267, F.301, F.304, K.305, V.308, Q.309, Q.312 Ligands: CLA.2, PID.8, PID.10 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:L.181, A:W.186, A:W.186, A:A.232, A:I.233, A:I.236, A:Y.247, A:V.250, A:L.254, A:I.258, A:I.258, A:V.266, A:F.304, A:Q.309 Hydrogen bonds: A:G.240, A:T.242 Water bridges: A:K.263, A:Q.309 pi-Stacking: A:F.301 PID.16: 25 residues within 4Å: Chain B: F.17, V.21, W.23, N.25, G.26, F.28, L.29, P.120, A.121, M.123, K.124, V.127, A.132, E.133, Y.136, L.195, A.200, S.203, L.204, I.207 Ligands: CLA.14, PID.17, PID.19, W4I.20, W4I.25 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:F.17, B:V.21, B:W.23, B:F.28, B:F.28, B:F.28, B:F.28, B:F.28, B:K.124, B:K.124, B:Y.136 Hydrogen bonds: B:K.124, B:S.203 PID.17: 24 residues within 4Å: Chain B: I.27, F.28, Q.30, A.31, P.32, G.33, D.116, K.118, V.119, Y.122, M.123, I.207, M.210, I.211 Chain C: L.292, D.293, A.296 Ligands: CLA.14, PID.16, PID.18, W4I.20, PID.22, PID.23, W4I.25 9 PLIP interactions: 8 interactions with chain B, 1 interactions with chain C Hydrophobic interactions: B:I.27, B:I.27, B:F.28, B:K.118, B:V.119, B:Y.122, B:Y.122, B:Y.122, C:A.296 PID.18: 25 residues within 4Å: Chain B: M.47, I.48, M.50, G.51, A.52, L.59, I.96, V.104, M.105, V.107, Y.108, Y.136, F.139, L.140, K.143, L.222, K.223, A.226 Ligands: CLA.14, CLA.15, PID.17, PID.19, W4I.20, PID.22, PID.23 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:M.47, B:V.107, B:Y.108, B:L.140, B:A.226 pi-Stacking: B:Y.108 PID.19: 31 residues within 4Å: Chain B: L.10, W.23, N.24, H.66, A.69, I.70, V.73, G.78, V.79, T.80, W.85, V.88, N.89, L.92, G.93, I.96, E.101, V.104, M.105, F.139, F.142, K.143, V.146, K.147, Q.150, A.200, Q.201, L.204 Ligands: CLA.14, PID.16, PID.18 21 PLIP interactions: 21 interactions with chain B Hydrophobic interactions: B:W.23, B:W.23, B:A.69, B:I.70, B:V.73, B:W.85, B:V.88, B:L.92, B:I.96, B:F.142, B:K.143, B:K.143, B:K.147, B:K.147 Hydrogen bonds: B:G.78, B:T.80, B:E.101, B:E.101, B:K.147, B:Q.201 pi-Stacking: B:F.139 PID.21: 31 residues within 4Å: Chain A: G.26, P.194 Chain B: A.31, P.32, L.35, P.37, A.40, L.41, I.44, I.114, F.180, I.184, W.186, S.188, D.189, Y.191, M.192, P.282, L.283, M.285, F.286, V.289, A.294, N.295, A.298, Y.302 Ligands: CLA.15, W4I.20, PID.22, PID.24, W4I.25 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.35, B:I.114, B:I.184, B:W.186, B:Y.191, B:Y.191, B:Y.191, B:P.282, B:M.285, B:F.286, B:F.286 Water bridges: B:S.188, B:N.295 PID.22: 27 residues within 4Å: Chain B: I.44, M.47, I.48, V.190, Y.191, K.193, P.194, L.195, P.196, D.278, S.280, I.281, N.284, M.285 Chain C: S.280, L.283, N.284, S.287 Ligands: PID.9, CLA.15, PID.17, PID.18, W4I.20, PID.21, PID.23, W4I.25, PID.35 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:Y.191, B:Y.191, B:P.196, B:I.281, B:I.281 Hydrogen bonds: B:N.284 PID.23: 25 residues within 4Å: Chain B: L.59, K.60, A.63, M.210, I.211, M.213, G.214, A.215, L.222, V.257, I.258, V.266, M.267, V.269, Y.270, F.301, Y.302, K.305 Ligands: CLA.14, CLA.15, PID.17, PID.18, PID.22, PID.24, W4I.25 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:L.222, B:L.222, B:V.266, B:V.269, B:Y.270, B:Y.270, B:Y.270, B:Y.302 Water bridges: B:Y.270 pi-Stacking: B:Y.270 PID.24: 32 residues within 4Å: Chain B: P.37, L.38, L.41, L.173, L.181, W.186, L.187, H.229, A.232, I.233, I.236, G.240, V.241, T.242, Y.247, V.250, N.251, L.254, G.255, I.258, K.263, V.266, M.267, F.301, F.304, K.305, V.308, Q.309, Q.312 Ligands: CLA.15, PID.21, PID.23 24 PLIP interactions: 24 interactions with chain B Hydrophobic interactions: B:L.181, B:W.186, B:W.186, B:A.232, B:I.233, B:I.236, B:T.242, B:Y.247, B:V.250, B:L.254, B:I.258, B:I.258, B:I.258, B:V.266, B:F.304, B:K.305, B:K.305, B:V.308, B:Q.309 Hydrogen bonds: B:G.240, B:T.242 Water bridges: B:K.263, B:Q.309 pi-Stacking: B:F.301 PID.29: 25 residues within 4Å: Chain C: F.17, V.21, W.23, N.25, G.26, F.28, L.29, P.120, A.121, M.123, K.124, V.127, A.132, E.133, Y.136, L.195, A.200, S.203, L.204, I.207 Ligands: CLA.27, PID.30, PID.32, W4I.33, W4I.38 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:F.17, C:V.21, C:W.23, C:F.28, C:F.28, C:F.28, C:F.28, C:F.28, C:K.124, C:K.124, C:Y.136 Hydrogen bonds: C:K.124, C:S.203 PID.30: 24 residues within 4Å: Chain A: L.292, D.293, A.296 Chain C: I.27, F.28, Q.30, A.31, P.32, G.33, D.116, K.118, V.119, Y.122, M.123, I.207, M.210, I.211 Ligands: CLA.27, PID.29, PID.31, W4I.33, PID.35, PID.36, W4I.38 8 PLIP interactions: 7 interactions with chain C, 1 interactions with chain A Hydrophobic interactions: C:I.27, C:I.27, C:F.28, C:K.118, C:V.119, C:Y.122, C:Y.122, A:A.296 PID.31: 24 residues within 4Å: Chain C: M.47, I.48, M.50, G.51, A.52, L.59, V.104, M.105, V.107, Y.108, Y.136, F.139, L.140, K.143, L.222, K.223, A.226 Ligands: CLA.27, CLA.28, PID.30, PID.32, W4I.33, PID.35, PID.36 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:M.47, C:V.107, C:Y.108, C:L.140, C:A.226 pi-Stacking: C:Y.108 PID.32: 30 residues within 4Å: Chain C: W.23, N.24, H.66, A.69, I.70, V.73, G.78, V.79, T.80, W.85, V.88, N.89, L.92, G.93, I.96, E.101, V.104, M.105, F.139, F.142, K.143, V.146, K.147, Q.150, A.200, Q.201, L.204 Ligands: CLA.27, PID.29, PID.31 21 PLIP interactions: 21 interactions with chain C Hydrophobic interactions: C:W.23, C:W.23, C:A.69, C:I.70, C:V.73, C:W.85, C:V.88, C:L.92, C:I.96, C:F.142, C:K.143, C:K.143, C:K.147, C:K.147 Hydrogen bonds: C:G.78, C:T.80, C:E.101, C:K.147, C:Q.201 Water bridges: C:E.101 pi-Stacking: C:F.139 PID.34: 30 residues within 4Å: Chain B: G.26, P.194 Chain C: A.31, P.32, L.35, P.37, A.40, L.41, I.44, I.114, F.180, I.184, W.186, S.188, Y.191, M.192, P.282, L.283, M.285, F.286, V.289, A.294, N.295, A.298, Y.302 Ligands: CLA.28, W4I.33, PID.35, PID.37, W4I.38 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:L.35, C:I.114, C:I.184, C:W.186, C:W.186, C:Y.191, C:Y.191, C:Y.191, C:P.282, C:L.283, C:M.285, C:F.286, C:F.286 Water bridges: C:S.188 PID.35: 26 residues within 4Å: Chain A: S.280, L.283, N.284, S.287 Chain C: I.44, M.47, I.48, V.190, Y.191, K.193, P.194, P.196, D.278, S.280, I.281, N.284, M.285 Ligands: PID.9, PID.22, CLA.28, PID.30, PID.31, W4I.33, PID.34, PID.36, W4I.38 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:Y.191, C:P.196, C:I.281, C:I.281 Hydrogen bonds: C:N.284 PID.36: 25 residues within 4Å: Chain C: L.59, K.60, A.63, M.210, I.211, M.213, G.214, A.215, L.222, V.257, I.258, V.266, M.267, V.269, Y.270, F.301, Y.302, K.305 Ligands: CLA.27, CLA.28, PID.30, PID.31, PID.35, PID.37, W4I.38 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:L.59, C:M.210, C:L.222, C:L.222, C:V.266, C:V.269, C:Y.270, C:Y.302 Water bridges: C:Y.270 pi-Stacking: C:Y.270 PID.37: 32 residues within 4Å: Chain C: P.37, L.38, L.41, L.173, L.181, W.186, L.187, H.229, A.232, I.233, I.236, G.240, V.241, T.242, Y.247, V.250, N.251, L.254, G.255, I.258, K.263, V.266, M.267, F.301, F.304, K.305, V.308, Q.309, Q.312 Ligands: CLA.28, PID.34, PID.36 23 PLIP interactions: 23 interactions with chain C Hydrophobic interactions: C:L.181, C:W.186, C:W.186, C:A.232, C:I.233, C:I.236, C:T.242, C:Y.247, C:V.250, C:L.254, C:I.258, C:I.258, C:I.258, C:V.266, C:F.304, C:K.305, C:K.305, C:Q.309 Hydrogen bonds: C:G.240, C:T.242 Water bridges: C:K.263, C:Q.309 pi-Stacking: C:F.301

6 x W4I: [(2~{S})-3-[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2-[(6~{Z},9~{Z},12~{Z},15~{Z})-octadeca-6,9,12,15-tetraenoyl]oxy-propyl] (5~{Z},8~{Z},11~{Z},14~{Z},17~{Z})-icosa-5,8,11,14,17-pentaenoate(Non-covalent)

W4I.7: 23 residues within 4Å: Chain A: L.29, P.32, I.44, M.47, V.107, Y.108, V.111, S.112, I.114, T.115, V.119, P.120, M.123, Y.136, Y.191, M.192 Ligands: CLA.1, PID.3, PID.4, PID.5, PID.8, PID.9, W4I.12 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.44, A:Y.108, A:Y.108, A:V.111, A:V.111, A:T.115 Hydrogen bonds: A:Y.108 W4I.12: 29 residues within 4Å: Chain A: F.28, L.29, L.195, I.207, M.210, V.269, Y.270, M.273, A.274, T.277, I.281, P.282, M.285, N.295, A.298, K.299, Y.302 Chain C: D.22, N.24, N.25, G.26, I.27 Ligands: CLA.2, PID.3, PID.4, W4I.7, PID.8, PID.9, PID.10 16 PLIP interactions: 5 interactions with chain C, 11 interactions with chain A Hydrogen bonds: C:D.22, C:G.26, A:Y.270, A:N.295, A:K.299, A:Y.302 Water bridges: C:D.22, C:N.24, C:N.24, A:Y.270 Hydrophobic interactions: A:L.29, A:L.195, A:I.207, A:Y.270, A:M.273, A:A.274 W4I.20: 22 residues within 4Å: Chain B: L.29, P.32, I.44, M.47, V.107, Y.108, V.111, S.112, I.114, T.115, V.119, P.120, Y.136, Y.191, M.192 Ligands: CLA.14, PID.16, PID.17, PID.18, PID.21, PID.22, W4I.25 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:P.32, B:I.44, B:Y.108, B:Y.108, B:V.111, B:V.119 Hydrogen bonds: B:Y.108 W4I.25: 29 residues within 4Å: Chain A: D.22, N.24, N.25, G.26, I.27 Chain B: F.28, L.29, L.195, I.207, M.210, V.269, Y.270, M.273, A.274, T.277, I.281, P.282, M.285, N.295, A.298, K.299, Y.302 Ligands: CLA.15, PID.16, PID.17, W4I.20, PID.21, PID.22, PID.23 16 PLIP interactions: 11 interactions with chain B, 5 interactions with chain A Hydrophobic interactions: B:L.29, B:L.195, B:I.207, B:Y.270, B:M.273, B:A.274 Hydrogen bonds: B:Y.270, B:N.295, B:K.299, B:Y.302, A:N.24, A:N.25, A:G.26 Water bridges: B:Y.270, A:N.24, A:N.24 W4I.33: 22 residues within 4Å: Chain C: P.32, I.44, M.47, V.107, Y.108, V.111, S.112, I.114, T.115, V.119, P.120, M.123, Y.136, Y.191, M.192 Ligands: CLA.27, PID.29, PID.30, PID.31, PID.34, PID.35, W4I.38 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:P.32, C:I.44, C:Y.108, C:T.115 Hydrogen bonds: C:Y.108 W4I.38: 29 residues within 4Å: Chain B: D.22, N.24, N.25, G.26, I.27 Chain C: F.28, L.29, L.195, I.207, M.210, V.269, Y.270, M.273, A.274, T.277, I.281, P.282, M.285, N.295, A.298, K.299, Y.302 Ligands: CLA.28, PID.29, PID.30, W4I.33, PID.34, PID.35, PID.36 16 PLIP interactions: 11 interactions with chain C, 5 interactions with chain B Hydrophobic interactions: C:L.29, C:L.195, C:I.207, C:Y.270, C:M.273, C:A.274 Hydrogen bonds: C:Y.270, C:N.295, C:K.299, C:Y.302, B:N.25, B:G.26 Water bridges: C:Y.270, B:D.22, B:N.24, B:N.24

3 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.13: 10 residues within 4Å: Chain A: P.196, G.197, V.198, Q.202, A.274, G.275, V.276, T.277, D.278, T.279 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.202 Water bridges: A:D.278, A:D.278, A:T.279 PG4.26: 9 residues within 4Å: Chain B: G.197, V.198, Q.202, A.274, G.275, V.276, T.277, D.278, T.279 3 PLIP interactions: 3 interactions with chain B Water bridges: B:Q.202, B:D.278, B:T.279 PG4.39: 10 residues within 4Å: Chain C: P.196, G.197, V.198, Q.202, A.274, G.275, V.276, T.277, D.278, T.279 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:Q.202 Water bridges: C:D.278, C:T.279

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schulte, T. et al., Structural and spectroscopic characterization of the peridinin-chlorophyll a-protein (PCP) complex from Heterocapsa pygmaea (HPPCP). Biochim Biophys Acta Bioenerg (2024)

Release Date

2024-05-15

Peptides

Peridinin-chlorophyll a-binding protein 1, chloroplastic: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
M

B
N

C
O

Peridinin-chlorophyll a-binding protein 1, chloroplastic