SMTL ID : 8ow8.1

Crystal Structure of the Catalytic Domain of a Botulinum Neurotoxin Homologue from Enterococcus faecium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.243, H.247, E.287, Y.385 Ligands: PO4.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.243, A:H.247, A:E.287, A:E.287

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 4 residues within 4Å: Chain A: T.21, I.22, K.120, N.123 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.22, A:I.22, A:N.123 PO4.3: 8 residues within 4Å: Chain A: K.186, G.187, H.243, E.244, H.247, E.287, Y.385 Ligands: ZN.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.186, A:H.247, A:Y.385 Salt bridges: A:H.243

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.4: 8 residues within 4Å: Chain A: L.43, L.46, V.48, I.53, Y.79, S.80, T.81, L.191 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.80, A:S.80

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 4 residues within 4Å: Chain A: V.166, L.167, K.168, H.169 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.166, A:H.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gregory, K.S. et al., Crystal Structure of the Catalytic Domain of a Botulinum Neurotoxin Homologue from Enterococcus faecium : Potential Insights into Substrate Recognition. Int J Mol Sci (2023)

Release Date

2023-08-30

Peptides

Botulinum-like toxin eBoNT/J light chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Botulinum-like toxin eBoNT/J light chain