SMTL ID : 8owx.1 (1 other biounit)

Crystal Structure of METTL6 bound to SAH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 17 residues within 4Å: Chain A: W.49, Y.53, W.66, E.89, G.91, G.93, N.96, D.114, F.115, C.139, D.140, L.141, I.161, F.162, V.163, A.166, V.167 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:Y.53, A:Y.53, A:G.93, A:N.96, A:F.115, A:D.140, A:L.141, A:T.142 pi-Stacking: A:F.115, A:F.115

1 x B3P: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

B3P.2: 7 residues within 4Å: Chain A: Q.46, Q.138, D.140, K.143, D.144, D.148, H.149 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.138, A:Q.138, A:D.140, A:H.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Throll, P. et al., Structural basis of tRNA recognition by the m 3 C RNA methyltransferase METTL6 in complex with SerRS seryl-tRNA synthetase. Nat.Struct.Mol.Biol. (2024)

Release Date

2024-05-08

Peptides

tRNA N(3)-methylcytidine methyltransferase METTL6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

tRNA N(3)-methylcytidine methyltransferase METTL6

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