SMTL ID : 8p50.1

Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin with the C-terminal deletion in complex with Arf3

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.1: 19 residues within 4Å: Chain B: L.28, D.29, A.30, A.31, G.32, K.33, T.34, T.35, T.47, T.51, G.73, N.129, K.130, D.132, L.133, C.162, A.163, T.164 Ligands: MG.2 20 PLIP interactions: 20 interactions with chain B Hydrogen bonds: B:A.30, B:A.31, B:G.32, B:K.33, B:T.34, B:T.34, B:T.34, B:T.35, B:T.47, B:T.47, B:T.51, B:G.73, B:N.129, B:K.130, B:K.130, B:A.163, B:T.164 Salt bridges: B:K.33, B:K.33, B:D.132

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain B: T.34, T.51 Ligands: GTP.1 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:T.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Belyy, A. et al., Structure and activation mechanism of the Makes caterpillars floppy 1 toxin. Nat Commun (2023)

Release Date

2023-11-01

Peptides

Toxin protein: A
ADP-ribosylation factor 3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Toxin protein

ADP-ribosylation factor 3

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