SMTL ID : 8p8x.1

Crystal structure of a pathogenic mutant variant of human mitochodnrial PheRS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.46 Å

Oligo State

monomer

Ligands

1 x PHE: PHENYLALANINE(Non-covalent)

PHE.1: 14 residues within 4Å: Chain A: H.119, S.121, Q.124, R.143, Q.157, E.159, F.232, F.234, T.235, G.254, C.255, A.275, F.276, G.277 16 PLIP interactions: 13 interactions with chain A, 3 Ligand-Ligand interactions Hydrophobic interactions: A:T.235 Hydrogen bonds: A:H.119, A:H.119, A:S.121, A:Q.157, F.1 Water bridges: A:T.120, A:S.121, A:R.143, A:R.143, A:G.254, F.1, F.1 Salt bridges: A:R.143 pi-Stacking: A:F.232, A:F.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, W. et al., Clinical and molecular characterization of novel FARS2 variants causing neonatal mitochondrial disease. Mol.Genet.Metab. (2023)

Release Date

2023-08-16

Peptides

Phenylalanine--tRNA ligase, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phenylalanine--tRNA ligase, mitochondrial