- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.21 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ACE- GLN- ALC- LV8- LEU- PHE: ACE-GLN-ALC-GLC-LEU-PHE(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 7 residues within 4Å:- Chain A: R.172, V.183, S.185, Y.248, Q.359, S.360, A.362
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:R.172, A:S.185, A:S.185, A:S.185, A:Y.248
- Water bridges: A:Q.359, A:A.361
GOL.3: 2 residues within 4Å:- Chain A: V.155, Y.157
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:V.155
GOL.4: 3 residues within 4Å:- Chain A: L.266, L.310, D.311
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.311, A:D.311
- Water bridges: A:D.311
GOL.5: 5 residues within 4Å:- Chain A: R.283, S.326, L.329, D.330, N.333
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.283, A:D.330, A:D.330, A:N.333
GOL.10: 7 residues within 4Å:- Chain B: R.172, V.183, S.185, Y.248, Q.359, S.360, A.362
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:R.172, B:S.185, B:S.185, B:S.185, B:Y.248
- Water bridges: B:Q.359, B:A.361
GOL.11: 2 residues within 4Å:- Chain B: V.155, Y.157
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:V.155
GOL.12: 3 residues within 4Å:- Chain B: L.266, L.310, D.311
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:D.311, B:D.311
- Water bridges: B:D.311
GOL.13: 5 residues within 4Å:- Chain B: R.283, S.326, L.329, D.330, N.333
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.283, B:D.330, B:N.333
- 6 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
1PE.6: 7 residues within 4Å:- Chain A: Q.19, S.22, L.25, G.26, R.77, F.80, R.84
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.22, A:R.77, A:R.77, A:R.84
1PE.7: 4 residues within 4Å:- Chain A: R.369
- Ligands: ACE-GLN-ALC-LV8-LEU-PHE.1, ACE-GLN-ALC-LV8-LEU-PHE.1, ACE-GLN-ALC-LV8-LEU-PHE.1
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.369, A:R.369
1PE.8: 6 residues within 4Å:- Chain A: N.216, P.217, R.219, H.230, V.231, G.232
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:G.232
1PE.14: 7 residues within 4Å:- Chain B: Q.19, S.22, L.25, G.26, R.77, F.80, R.84
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:S.22, B:R.77, B:R.77, B:R.84
1PE.15: 4 residues within 4Å:- Chain B: R.369
- Ligands: ACE-GLN-ALC-LV8-LEU-PHE.9, ACE-GLN-ALC-LV8-LEU-PHE.9, ACE-GLN-ALC-LV8-LEU-PHE.9
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.369, B:R.369
1PE.16: 6 residues within 4Å:- Chain B: N.216, P.217, R.219, H.230, V.231, G.232
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:G.232
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Compain, G. et al., Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp. Jacs Au (2024)
- Release Date
- 2024-03-13
- Peptides
- Beta sliding clamp: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.21 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ACE- GLN- ALC- LV8- LEU- PHE: ACE-GLN-ALC-GLC-LEU-PHE(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 6 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Compain, G. et al., Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp. Jacs Au (2024)
- Release Date
- 2024-03-13
- Peptides
- Beta sliding clamp: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A