SMTL ID : 8pfc.8 (7 other biounits)

Crystal structure of binary complex between Aster yellows witches'-broom phytoplasma effector SAP05 and the zinc finger domain of SPL5 from Arabidopsis thaliana

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain B: C.6, C.11, C.28, H.31 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.6, B:C.11, B:C.28, B:H.31 ZN.2: 5 residues within 4Å: Chain B: C.47, C.50, H.54, C.66, R.68 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.47, B:C.50, B:H.54, B:C.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Q. et al., Bimodular architecture of bacterial effector SAP05 that drives ubiquitin-independent targeted protein degradation. Proc.Natl.Acad.Sci.USA (2023)

Release Date

2023-07-05

Peptides

Sequence-variable mosaic (SVM) signal sequence domain-containing protein: A
Squamosa promoter-binding-like protein 5: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
O

B
P

Sequence-variable mosaic (SVM) signal sequence domain-containing protein

Squamosa promoter-binding-like protein 5

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