SMTL ID : 8phf.1

Cryo-EM structure of human ACAD9-S191A

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)(Covalent)

FAD.1: 28 residues within 4Å: Chain A: R.293, Q.295, F.296, L.300, F.303, L.305, I.306, K.309, Q.363, I.364, L.365, G.366, G.367 Chain B: I.112, F.142, L.144, T.145, S.149, G.150, S.151, W.177, T.179, I.385, F.389, T.392, E.394, M.398, Q.491 14 PLIP interactions: 6 interactions with chain B, 8 interactions with chain A Hydrophobic interactions: B:W.177, B:W.177, B:I.385 Hydrogen bonds: B:S.151, B:S.151, B:T.392, A:Q.295, A:K.309, A:Q.363, A:I.364, A:G.367 Salt bridges: A:R.293, A:R.293 pi-Stacking: A:F.303 FAD.2: 26 residues within 4Å: Chain A: L.144, T.145, G.150, S.151, W.177, T.179, K.226, F.389, T.392, E.394, I.395, M.398, Q.491 Chain B: Y.289, R.293, Q.295, F.296, L.300, F.303, I.306, K.309, Q.363, I.364, L.365, G.367, L.368 12 PLIP interactions: 7 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:Y.289, B:Q.295, B:K.309, B:G.367, A:T.392, A:Q.491 Salt bridges: B:R.293, B:R.293 pi-Stacking: B:F.303 Hydrophobic interactions: A:W.177, A:W.177, A:F.389

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McGregor, L. et al., The assembly of the Mitochondrial Complex I Assembly complex uncovers a redox pathway coordination. Nat Commun (2023)

Release Date

2024-01-24

Peptides

Complex I assembly factor ACAD9, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Complex I assembly factor ACAD9, mitochondrial