- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-24-mer
- Ligands
- 20 x GOL: GLYCEROL(Non-functional Binders)
- 24 x FE: FE (III) ION(Non-covalent)
FE.3: 5 residues within 4Å:- Chain A: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.23, A:E.58, A:H.61, H2O.1, H2O.2
FE.5: 4 residues within 4Å:- Chain B: E.23, E.58, H.61, V.106
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.23, B:E.58, B:H.61, H2O.4, H2O.5
FE.8: 5 residues within 4Å:- Chain C: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:E.23, C:E.58, C:H.61, H2O.7, H2O.7
FE.10: 5 residues within 4Å:- Chain D: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:E.23, D:E.58, D:H.61, H2O.11, H2O.11
FE.12: 5 residues within 4Å:- Chain E: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain E, 2 Ligand-Water interactions- Metal complexes: E:E.23, E:E.58, E:H.61, H2O.15, H2O.15
FE.13: 4 residues within 4Å:- Chain F: E.23, E.58, H.61, V.106
5 PLIP interactions:3 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: F:E.23, F:E.58, F:H.61, H2O.19, H2O.20
FE.17: 5 residues within 4Å:- Chain G: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain G, 2 Ligand-Water interactions- Metal complexes: G:E.23, G:E.58, G:H.61, H2O.22, H2O.23
FE.19: 4 residues within 4Å:- Chain H: E.23, E.58, H.61, V.106
5 PLIP interactions:3 interactions with chain H, 2 Ligand-Water interactions- Metal complexes: H:E.23, H:E.58, H:H.61, H2O.26, H2O.26
FE.22: 5 residues within 4Å:- Chain I: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain I, 2 Ligand-Water interactions- Metal complexes: I:E.23, I:E.58, I:H.61, H2O.28, H2O.29
FE.24: 5 residues within 4Å:- Chain J: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain J, 2 Ligand-Water interactions- Metal complexes: J:E.23, J:E.58, J:H.61, H2O.33, H2O.33
FE.26: 5 residues within 4Å:- Chain K: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain K, 2 Ligand-Water interactions- Metal complexes: K:E.23, K:E.58, K:H.61, H2O.36, H2O.37
FE.27: 4 residues within 4Å:- Chain L: E.23, E.58, H.61, V.106
5 PLIP interactions:3 interactions with chain L, 2 Ligand-Water interactions- Metal complexes: L:E.23, L:E.58, L:H.61, H2O.41, H2O.41
FE.31: 5 residues within 4Å:- Chain M: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain M, 2 Ligand-Water interactions- Metal complexes: M:E.23, M:E.58, M:H.61, H2O.44, H2O.45
FE.33: 4 residues within 4Å:- Chain N: E.23, E.58, H.61, V.106
5 PLIP interactions:3 interactions with chain N, 2 Ligand-Water interactions- Metal complexes: N:E.23, N:E.58, N:H.61, H2O.47, H2O.48
FE.36: 5 residues within 4Å:- Chain O: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain O, 2 Ligand-Water interactions- Metal complexes: O:E.23, O:E.58, O:H.61, H2O.50, H2O.50
FE.38: 5 residues within 4Å:- Chain P: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain P, 2 Ligand-Water interactions- Metal complexes: P:E.23, P:E.58, P:H.61, H2O.54, H2O.55
FE.40: 5 residues within 4Å:- Chain Q: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain Q, 2 Ligand-Water interactions- Metal complexes: Q:E.23, Q:E.58, Q:H.61, H2O.58, H2O.59
FE.41: 4 residues within 4Å:- Chain R: E.23, E.58, H.61, V.106
5 PLIP interactions:3 interactions with chain R, 2 Ligand-Water interactions- Metal complexes: R:E.23, R:E.58, R:H.61, H2O.63, H2O.63
FE.45: 5 residues within 4Å:- Chain S: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain S, 2 Ligand-Water interactions- Metal complexes: S:E.23, S:E.58, S:H.61, H2O.66, H2O.67
FE.47: 4 residues within 4Å:- Chain T: E.23, E.58, H.61, V.106
5 PLIP interactions:3 interactions with chain T, 2 Ligand-Water interactions- Metal complexes: T:E.23, T:E.58, T:H.61, H2O.69, H2O.70
FE.50: 5 residues within 4Å:- Chain U: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain U, 2 Ligand-Water interactions- Metal complexes: U:E.23, U:E.58, U:H.61, H2O.72, H2O.72
FE.52: 5 residues within 4Å:- Chain V: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain V, 2 Ligand-Water interactions- Metal complexes: V:E.23, V:E.58, V:H.61, H2O.76, H2O.76
FE.54: 5 residues within 4Å:- Chain W: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain W, 2 Ligand-Water interactions- Metal complexes: W:E.23, W:E.58, W:H.61, H2O.80, H2O.80
FE.55: 4 residues within 4Å:- Chain X: E.23, E.58, H.61, V.106
5 PLIP interactions:3 interactions with chain X, 2 Ligand-Water interactions- Metal complexes: X:E.23, X:E.58, X:H.61, H2O.85, H2O.85
- 12 x MG: MAGNESIUM ION(Non-covalent)
MG.6: 3 residues within 4Å:- Chain B: E.130
- Chain F: E.130
- Chain M: E.130
No protein-ligand interaction detected (PLIP)MG.9: 3 residues within 4Å:- Chain C: E.130
- Chain D: E.130
- Chain E: E.130
No protein-ligand interaction detected (PLIP)MG.14: 4 residues within 4Å:- Chain B: D.127
- Chain F: D.127
- Chain M: D.127, E.130
3 PLIP interactions:1 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: F:D.127, H2O.4, H2O.44
MG.20: 3 residues within 4Å:- Chain H: E.130
- Chain L: E.130
- Chain S: E.130
No protein-ligand interaction detected (PLIP)MG.23: 3 residues within 4Å:- Chain I: E.130
- Chain J: E.130
- Chain K: E.130
No protein-ligand interaction detected (PLIP)MG.28: 4 residues within 4Å:- Chain H: D.127
- Chain L: D.127
- Chain S: D.127, E.130
3 PLIP interactions:1 interactions with chain L, 2 Ligand-Water interactions- Metal complexes: L:D.127, H2O.26, H2O.66
MG.34: 3 residues within 4Å:- Chain G: E.130
- Chain N: E.130
- Chain R: E.130
No protein-ligand interaction detected (PLIP)MG.37: 3 residues within 4Å:- Chain O: E.130
- Chain P: E.130
- Chain Q: E.130
No protein-ligand interaction detected (PLIP)MG.42: 4 residues within 4Å:- Chain G: D.127, E.130
- Chain N: D.127
- Chain R: D.127
3 PLIP interactions:1 interactions with chain R, 2 Ligand-Water interactions- Metal complexes: R:D.127, H2O.22, H2O.47
MG.48: 3 residues within 4Å:- Chain A: E.130
- Chain T: E.130
- Chain X: E.130
No protein-ligand interaction detected (PLIP)MG.51: 3 residues within 4Å:- Chain U: E.130
- Chain V: E.130
- Chain W: E.130
No protein-ligand interaction detected (PLIP)MG.56: 4 residues within 4Å:- Chain A: D.127, E.130
- Chain T: D.127
- Chain X: D.127
3 PLIP interactions:1 interactions with chain X, 2 Ligand-Water interactions- Metal complexes: X:D.127, H2O.1, H2O.69
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lang, L. et al., Assembly Requirements for the Construction of Large-Scale Binary Protein Structures. Biomacromolecules (2024)
- Release Date
- 2023-12-27
- Peptides
- Ferritin heavy chain, N-terminally processed: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
AH
BI
CJ
DK
EL
FM
AN
BO
CP
DQ
ER
FS
AT
BU
CV
DW
EX
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-24-mer
- Ligands
- 20 x GOL: GLYCEROL(Non-functional Binders)
- 24 x FE: FE (III) ION(Non-covalent)
- 12 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lang, L. et al., Assembly Requirements for the Construction of Large-Scale Binary Protein Structures. Biomacromolecules (2024)
- Release Date
- 2023-12-27
- Peptides
- Ferritin heavy chain, N-terminally processed: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
AH
BI
CJ
DK
EL
FM
AN
BO
CP
DQ
ER
FS
AT
BU
CV
DW
EX
F