SMTL ID : 8pyw.1

Crystal structure of the human Nucleoside-diphosphate kinase B domain bound to compound diphosphate form of AT-9052-Sp.

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.55 Å
Oligo State
homo-hexamer
Ligands
3 x GOL: GLYCEROL(Non-functional Binders)
6 x IF9: [[(2R,3R,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methoxy-sulfanyl-phosphoryl] dihydrogen phosphate(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Shannon, A. et al., An exonuclease-resistant chain-terminating nucleotide analogue targeting the SARS-CoV-2 replicase complex. Nucleic Acids Res. (2024)
Release Date
2023-12-27
Peptides
Nucleoside diphosphate kinase B: ABCDEF
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F

Nucleoside diphosphate kinase B

Toggle Identical (ABCDEF)