SMTL ID : 8q0u.2 (1 other biounit)

Identification and optimisation of novel inhibitors of the Polyketide synthetase 13 thioesterase domain with antitubercular activity

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.215, G.250 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.250 Salt bridges: A:R.215

1 x IKG: ~{N}-[(1~{R})-2-[4-(azetidin-1-ylcarbonyl)phenyl]-1-cyano-ethyl]-3-(3,4-dimethoxyphenyl)-1,2,4-oxadiazole-5-carboxamide(Non-covalent)

IKG.2: 19 residues within 4Å: Chain A: S.86, L.87, V.90, A.114, V.115, R.116, N.193, I.196, I.201, Y.216, H.217, D.219, A.220, F.223, Y.227, G.234, G.235, W.236, H.252 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:V.90, A:R.116, A:I.196, A:Y.216, A:A.220, A:F.223, A:W.236 Hydrogen bonds: A:Y.216, A:Y.227, A:Y.227 Water bridges: A:R.116, A:R.116, A:A.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Green, S.R. et al., Identification and Optimization of Novel Inhibitors of the Polyketide Synthase 13 Thioesterase Domain with Antitubercular Activity. J.Med.Chem. (2023)

Release Date

2023-11-22

Peptides

Polyketide synthase Pks13: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Polyketide synthase Pks13

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