SMTL ID : 8q3u.1

Crystal structure of a fentanyl derivative in complex with human CA VII

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.98, H.100, E.110, H.123, T.203 Ligands: J8I.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.98, A:H.100, A:H.123

1 x J8I: ~{N}-phenyl-~{N}-[1-[2-(4-sulfamoylphenyl)ethyl]piperidin-4-yl]propanamide(Non-covalent)

J8I.2: 18 residues within 4Å: Chain A: Y.24, Q.96, H.98, H.100, E.110, H.123, V.125, F.135, G.136, A.139, V.147, L.202, T.203, T.204, P.205, P.206, W.213 Ligands: ZN.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.125, A:L.202, A:P.206 Hydrogen bonds: A:T.203, A:T.203

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: C.58, M.59, S.60, L.61, N.75, S.181, C.182 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.75 GOL.4: 8 residues within 4Å: Chain A: S.39, S.40, A.42, Y.44, A.262, F.264, R.265, A.266 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.40, A:F.264, A:A.266

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Angeli, A. et al., Discovery of a novel series of potent carbonic anhydrase inhibitors with selective affinity for mu Opioid receptor for Safer and long-lasting analgesia. Eur.J.Med.Chem. (2023)

Release Date

2023-09-20

Peptides

Carbonic anhydrase 7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 7

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