SMTL ID : 8q6h.1

HUMAN PI4KIIIB IN COMPLEX WITH COVALENTLY BOUND INHIBITOR (COMPOUND 11)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: Q.417, T.420, N.421, G.422 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:Q.417, A:T.420, A:G.422

1 x KI7: 3-(3-fluorosulfonyloxy-4-methoxy-phenyl)-7-[(4-fluorosulfonyloxyphenyl)methylamino]-2,5-dimethyl-pyrazolo[1,5-a]pyrimidine(Covalent)

KI7.2: 17 residues within 4Å: Chain A: P.92, L.94, Y.96, W.145, K.148, I.170, K.172, E.180, Y.206, I.218, P.220, V.221, V.222, A.224, L.286, I.296, D.297 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.94, A:Y.206, A:Y.206, A:I.218, A:I.296, A:I.296 Hydrogen bonds: A:V.221, A:V.221

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: W.145, L.166, L.167, S.168, E.219, V.222 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.168, A:S.168, A:E.219 Water bridges: A:W.145, A:L.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cosgrove, B. et al., Covalent targeting of non-cysteine residues in PI4KIII beta. Rsc Chem Biol (2023)

Release Date

2023-12-13

Peptides

Phosphatidylinositol 4-kinase beta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphatidylinositol 4-kinase beta

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