SMTL ID : 8qbn.1

Structure of the non-canonical CTLH E3 substrate receptor WDR26 bound to YPEL5

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.300, H.303, H.320, C.322 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.300, A:H.303, A:H.320, A:C.322 ZN.2: 5 residues within 4Å: Chain B: C.300, H.303, N.304, H.320, C.322 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.300, B:H.303, B:H.320, B:C.322 ZN.3: 4 residues within 4Å: Chain C: C.17, C.20, C.73, C.76 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.17, C:C.20, C:C.73, C:C.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gottemukkala, K.V. et al., Non-canonical substrate recognition by the human WDR26-CTLH E3 ligase regulates prodrug metabolism. Mol.Cell (2024)

Release Date

2024-05-15

Peptides

WD repeat-containing protein 26: AB
Protein yippee-like 5: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
7

B
W

C
Y

WD repeat-containing protein 26

Protein yippee-like 5

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