- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Covalent)
ATP.2: 28 residues within 4Å:- Chain A: D.156, I.157, V.158, S.159, F.160, S.161, I.198, G.199, D.200, R.283
- Chain B: F.154, I.198, L.268, G.269, D.270, V.272, N.273, A.276
- Chain C: F.154, I.198, L.268, G.269, D.270, V.272, N.273, A.276
- Ligands: MG.3, MG.4
12 PLIP interactions:2 interactions with chain C, 6 interactions with chain A, 4 interactions with chain B- Hydrogen bonds: C:G.269, C:N.273, A:D.156, A:S.159, A:F.160, A:S.161, A:D.200, B:G.269, B:G.269, B:N.273, B:N.273
- Salt bridges: A:R.283
ATP.6: 33 residues within 4Å:- Chain A: F.154, I.198, L.268, G.269, D.270, V.272, N.273, A.276
- Chain B: D.156, I.157, V.158, S.159, F.160, S.161, I.198, G.199, D.200, R.283
- Chain C: D.156, I.157, V.158, S.159, F.160, S.161, I.198, G.199, D.200, R.283
- Ligands: MG.7, MG.8, ATP.10, MG.11, MG.12
28 PLIP interactions:13 interactions with chain C, 12 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: C:S.159, C:F.160, C:S.161, C:S.161, C:D.200, C:D.200, B:D.156, B:D.156, B:D.156, B:S.159, B:S.159, B:F.160, B:S.161, B:S.161, B:D.200, A:G.269, A:N.273, A:N.273
- Water bridges: C:D.156, C:D.156, C:D.156, C:D.156, C:R.283, C:R.283, B:D.156, B:D.156
- Salt bridges: C:R.283, B:R.283
ATP.10: 33 residues within 4Å:- Chain A: F.154, I.198, L.268, G.269, D.270, V.272, N.273, A.276
- Chain B: D.156, I.157, V.158, S.159, F.160, S.161, I.198, G.199, D.200, R.283
- Chain C: D.156, I.157, V.158, S.159, F.160, S.161, I.198, G.199, D.200, R.283
- Ligands: ATP.6, MG.7, MG.8, MG.11, MG.12
28 PLIP interactions:13 interactions with chain C, 12 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: C:S.159, C:F.160, C:S.161, C:S.161, C:D.200, C:D.200, B:D.156, B:D.156, B:D.156, B:S.159, B:S.159, B:F.160, B:S.161, B:S.161, B:D.200, A:G.269, A:N.273, A:N.273
- Water bridges: C:D.156, C:D.156, C:D.156, C:D.156, C:R.283, C:R.283, B:D.156, B:D.156
- Salt bridges: C:R.283, B:R.283
- 6 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 7 residues within 4Å:- Chain A: D.156, I.157, F.160, D.200, R.283
- Ligands: ATP.2, MG.4
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:D.156, A:I.157, A:D.200
MG.4: 5 residues within 4Å:- Chain A: D.156, D.200, C.201
- Ligands: ATP.2, MG.3
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.156, A:D.200, H2O.2, H2O.3
MG.7: 15 residues within 4Å:- Chain B: D.156, I.157, F.160, D.200, R.283
- Chain C: D.156, I.157, F.160, D.200, R.283
- Ligands: ATP.6, MG.8, ATP.10, MG.11, MG.12
5 PLIP interactions:2 interactions with chain C, 3 interactions with chain B- Metal complexes: C:I.157, C:D.200, B:D.156, B:I.157, B:D.200
MG.8: 11 residues within 4Å:- Chain B: D.156, D.200, C.201
- Chain C: D.156, D.200, C.201
- Ligands: ATP.6, MG.7, ATP.10, MG.11, MG.12
4 PLIP interactions:1 interactions with chain B, 1 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: B:D.156, C:D.156, H2O.6, H2O.9
MG.11: 15 residues within 4Å:- Chain B: D.156, I.157, F.160, D.200, R.283
- Chain C: D.156, I.157, F.160, D.200, R.283
- Ligands: ATP.6, MG.7, MG.8, ATP.10, MG.12
5 PLIP interactions:2 interactions with chain C, 3 interactions with chain B- Metal complexes: C:I.157, C:D.200, B:D.156, B:I.157, B:D.200
MG.12: 11 residues within 4Å:- Chain B: D.156, D.200, C.201
- Chain C: D.156, D.200, C.201
- Ligands: ATP.6, MG.7, MG.8, ATP.10, MG.11
4 PLIP interactions:1 interactions with chain B, 1 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: B:D.156, C:D.156, H2O.6, H2O.9
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chretien, A. et al., Light-induced Trp in /Met out Switching During BLUF Domain Activation in ATP-bound Photoactivatable Adenylate Cyclase OaPAC. J.Mol.Biol. (2024)
- Release Date
- 2023-11-01
- Peptides
- Family 3 adenylate cyclase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Covalent)
- 6 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chretien, A. et al., Light-induced Trp in /Met out Switching During BLUF Domain Activation in ATP-bound Photoactivatable Adenylate Cyclase OaPAC. J.Mol.Biol. (2024)
- Release Date
- 2023-11-01
- Peptides
- Family 3 adenylate cyclase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A