SMTL ID : 8qmb.1

Nucleant-assisted 2.0 A resolution structure of the Streptococcus pneumoniae topoisomerase IV-V18mer DNA complex with the novel fluoroquinolone Delafloxacin

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.00 Å
Oligo State
homo-dimer
Ligands
1 x DT- DG- DT- DG- DG- DA- DT: DNA (5'-D(TP*GP*TP*GP*GP*AP*T)-3')(Non-covalent)
1 x DG- DT- DA- DA- DT- DA- DC: DNA (5'-D(GP*TP*AP*AP*TP*AP*C)-3')(Non-covalent)
6 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
2 x CL: CHLORIDE ION(Non-functional Binders)
3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
2 x MLA: MALONIC ACID(Non-covalent)
4 x ACT: ACETATE ION(Non-functional Binders)
4 x FMT: FORMIC ACID(Non-functional Binders)
2 x TE9: delafloxacin(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Najmudin, S. et al., The nature of the molecular interactions at high resolution of the Streptococcus pneumoniae topoisomerase IV-DNA complex with the novel fluoroquinolone Delafloxacin. To Be Published
Release Date
2024-10-02
Peptides
DNA topoisomerase 4 subunit B,DNA topoisomerase 4 subunit A: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

DNA topoisomerase 4 subunit B,DNA topoisomerase 4 subunit A

Toggle Identical (AB)

Related Entries With Identical Sequence

4z3o.1 | 4z4q.1 | 4z53.1 | 8c41.1 | 8qmc.1