SMTL ID : 8qmd.3 (4 other biounits)

Human NK cell receptor NKp80, extracellular domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain A: W.75, N.116, W.126, V.127 Chain B: D.77, E.84 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:W.75 Hydrogen bonds: A:N.116, A:V.127, B:E.84 NAG.2: 7 residues within 4Å: Chain A: D.77, E.84 Chain B: W.75, N.116, V.127, N.146, C.161 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:D.77, A:D.77, B:N.116 Water bridges: A:K.73 Hydrophobic interactions: B:W.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pazderova, K. et al., Structure of the human NK cell activation receptor NKp80 ectodomain. To Be Published

Release Date

2025-04-02

Peptides

Killer cell lectin-like receptor subfamily F member 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

Killer cell lectin-like receptor subfamily F member 1

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