SMTL ID : 8qms.1 (1 other biounit)

Succinic semialdehyde dehydrogenase from E. coli with Q262R substitution and bound NAD+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 28 residues within 4Å: Chain A: I.133, M.134, P.135, W.136, N.137, Q.142, R.145, K.160, H.161, A.162, P.163, N.193, V.196, T.211, G.212, S.213, R.215, A.216, A.219, I.220, E.234, L.235, G.236, C.268, E.365, F.367, L.393, F.431 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:T.211 Hydrogen bonds: A:M.134, A:M.134, A:W.136, A:R.145, A:R.145, A:K.160, A:S.213, A:S.213, A:R.215, A:E.234, A:L.235, A:G.237, A:R.312, A:E.365 Water bridges: A:N.193, A:N.193, A:Q.223, A:G.236, A:E.365 NAD.2: 28 residues within 4Å: Chain B: I.133, M.134, P.135, W.136, N.137, Q.142, R.145, K.160, H.161, A.162, P.163, N.193, V.196, T.211, G.212, S.213, A.216, A.219, I.220, E.234, L.235, G.236, G.237, C.268, E.365, F.367, L.393, F.431 22 PLIP interactions: 22 interactions with chain B Hydrophobic interactions: B:T.211 Hydrogen bonds: B:M.134, B:M.134, B:W.136, B:R.145, B:R.145, B:K.160, B:N.193, B:S.213, B:S.213, B:L.235, B:G.237, B:E.365 Water bridges: B:Q.223, B:Q.223, B:Q.223, B:G.236, B:R.312, B:R.312, B:R.312, B:E.365, B:E.365

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

He, H. et al., Adaptive laboratory evolution recruits the promiscuity of succinate semialdehyde dehydrogenase to repair different metabolic deficiencies. Nat Commun (2024)

Release Date

2024-10-02

Peptides

Succinate semialdehyde dehydrogenase [NAD(P)+] Sad: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Succinate semialdehyde dehydrogenase [NAD(P)+] Sad

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