SMTL ID : 8qrt.1 (1 other biounit)

Acyl-ACP thioesterase from Lemna paucicostata in complex with a spirolactam

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x WP2: (5~{S})-7-[[2,6-bis(fluoranyl)phenyl]methyl]-3-(3-methylthiophen-2-yl)-1-oxa-2,7-diazaspiro[4.4]non-2-en-6-one(Non-covalent)

WP2.1: 15 residues within 4Å: Chain A: Q.71, H.77, A.78, V.81, F.83, G.87, A.89, W.101, C.126, T.134, R.136, W.156, Y.177, F.180, C.181 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.81, A:F.83, A:A.89, A:W.156, A:W.156, A:W.156, A:W.156, A:F.180 Hydrogen bonds: A:R.136 WP2.2: 14 residues within 4Å: Chain B: H.77, A.78, V.81, F.83, G.87, A.89, W.101, C.126, T.134, R.136, W.156, Y.177, F.180, C.181 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:V.81, B:F.83, B:A.89, B:W.156, B:W.156, B:W.156, B:F.180 Hydrogen bonds: B:R.136 pi-Stacking: B:W.156

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Asmus, E. et al., Discovery and Optimization of Spirocyclic Lactams that Inhibit Acyl-ACP Thioesterase. Pest Manag Sci (2024)

Release Date

2024-02-21

Peptides

Acyl-acp thioesterase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
BBB

Acyl-acp thioesterase

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